Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDH13P55290 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.84□□□□□ -1.64
CDH13P55290 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 BX005019.1-201ENST00000561881 1810 ntBASIC4.83□□□□□ -1.64
CDH13P55290 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH13P55290 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.83□□□□□ -1.64
CDH13P55290 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 GTF2H2B-203ENST00000508065 1432 ntBASIC4.83□□□□□ -1.64
CDH13P55290 AC009643.2-201ENST00000603543 1448 ntBASIC4.83□□□□□ -1.64
CDH13P55290 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 BTBD10P1-201ENST00000549824 1352 ntBASIC4.83□□□□□ -1.64
CDH13P55290 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH13P55290 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDH13P55290 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH13P55290 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH13P55290 RNU4-44P-201ENST00000363050 141 ntBASIC4.83□□□□□ -1.64
CDH13P55290 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH13P55290 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.83□□□□□ -1.64
CDH13P55290 AP000357.1-201ENST00000409926 1165 ntBASIC4.83□□□□□ -1.64
CDH13P55290 TMBIM7P-201ENST00000418074 855 ntBASIC4.83□□□□□ -1.64
CDH13P55290 RPL36AP10-201ENST00000421785 322 ntBASIC4.83□□□□□ -1.64
CDH13P55290 MTCO2P1-201ENST00000424648 477 ntBASIC4.83□□□□□ -1.64
CDH13P55290 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH13P55290 FHP1-201ENST00000442741 703 ntBASIC4.83□□□□□ -1.64
CDH13P55290 RPL34P20-201ENST00000442771 351 ntBASIC4.83□□□□□ -1.64
CDH13P55290 AL354714.3-201ENST00000447284 493 ntBASIC4.83□□□□□ -1.64
CDH13P55290 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH13P55290 CYCSP20-201ENST00000473154 315 ntBASIC4.83□□□□□ -1.64
CDH13P55290 RN7SL174P-201ENST00000475578 289 ntBASIC4.83□□□□□ -1.64
CDH13P55290 RPL21P47-201ENST00000483696 477 ntBASIC4.83□□□□□ -1.64
CDH13P55290 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH13P55290 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH13P55290 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.83□□□□□ -1.64
CDH13P55290 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH13P55290 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH13P55290 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH13P55290 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH13P55290 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH13P55290 IMMP1LP3-201ENST00000604197 224 ntBASIC4.83□□□□□ -1.64
CDH13P55290 AC126915.2-201ENST00000610957 190 ntBASIC4.83□□□□□ -1.64
CDH13P55290 AL121890.2-201ENST00000617644 465 ntBASIC4.83□□□□□ -1.64
CDH13P55290 AC011815.3-201ENST00000624194 473 ntBASIC4.83□□□□□ -1.64
CDH13P55290 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH13P55290 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
CDH13P55290 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDH13P55290 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH13P55290 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 AC005332.5-201ENST00000591222 2919 ntBASIC4.82□□□□□ -1.64
CDH13P55290 MFSD8-213ENST00000641134 1327 ntBASIC4.82□□□□□ -1.64
CDH13P55290 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDH13P55290 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH13P55290 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH13P55290 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CDH13P55290 MIR142-201ENST00000384835 87 ntBASIC4.82□□□□□ -1.64
CDH13P55290 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDH13P55290 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.82□□□□□ -1.64
CDH13P55290 OR13Z1P-201ENST00000416141 834 ntBASIC4.82□□□□□ -1.64
CDH13P55290 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 AC005189.1-201ENST00000431286 310 ntBASIC4.82□□□□□ -1.64
CDH13P55290 AL353093.1-201ENST00000441292 436 ntBASIC4.82□□□□□ -1.64
CDH13P55290 AC002553.2-201ENST00000453217 340 ntBASIC4.82□□□□□ -1.64
CDH13P55290 AC008379.1-201ENST00000463655 464 ntBASIC4.82□□□□□ -1.64
CDH13P55290 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH13P55290 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH13P55290 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH13P55290 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH13P55290 IGLVIV-64-201ENST00000518581 301 ntBASIC4.82□□□□□ -1.64
CDH13P55290 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH13P55290 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH13P55290 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH13P55290 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH13P55290 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH13P55290 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CDH13P55290 EIF1P5-201ENST00000585002 234 ntBASIC4.82□□□□□ -1.64
CDH13P55290 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH13P55290 AL512329.2-201ENST00000607350 548 ntBASIC4.82□□□□□ -1.64
CDH13P55290 OR2BH1P-201ENST00000608850 864 ntBASIC4.82□□□□□ -1.64
CDH13P55290 MIR7973-1-201ENST00000614683 76 ntBASIC4.82□□□□□ -1.64
CDH13P55290 AL049794.2-201ENST00000616301 365 ntBASIC4.82□□□□□ -1.64
CDH13P55290 AC018926.1-201ENST00000616335 435 ntBASIC4.82□□□□□ -1.64
CDH13P55290 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms