Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.14□□□□□ -1.43
EPHB3P54753 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 AC099654.14-201ENST00000638599 341 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
EPHB3P54753 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
EPHB3P54753 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
EPHB3P54753 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
EPHB3P54753 AC112243.1-201ENST00000623949 3851 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AP000776.1-201ENST00000530032 1663 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 NAMPTP1-201ENST00000440465 2514 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
EPHB3P54753 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
EPHB3P54753 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 AC007068.1-201ENST00000396690 844 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 MTCO3P31-201ENST00000405526 789 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.13□□□□□ -1.43
EPHB3P54753 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.13□□□□□ -1.43
EPHB3P54753 MTND1P14-201ENST00000427400 950 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC104651.1-201ENST00000427559 735 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.13□□□□□ -1.43
EPHB3P54753 CDY14P-201ENST00000431260 1014 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC005189.1-201ENST00000431286 310 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.13□□□□□ -1.43
EPHB3P54753 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 RPS12P17-201ENST00000438591 377 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 MTND3P1-201ENST00000441336 220 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.13□□□□□ -1.43
EPHB3P54753 EEF1E1P1-201ENST00000446998 430 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC073909.1-201ENST00000447112 999 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 MTND5P20-201ENST00000448677 143 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 CDY23P-201ENST00000451661 1014 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 RNU1-88P-201ENST00000459274 128 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 RPS23P6-201ENST00000466136 431 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC011979.1-201ENST00000472300 483 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC105918.1-201ENST00000474399 838 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 RN7SL177P-201ENST00000476596 299 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC037198.2-201ENST00000478845 733 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 RPS4XP14-201ENST00000493072 781 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.13□□□□□ -1.43
EPHB3P54753 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 AC117522.1-201ENST00000509821 380 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 RN7SKP288-201ENST00000516227 268 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 Y_RNA.702-201ENST00000516843 96 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 OR5D2P-201ENST00000524390 911 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 MTCO3P15-201ENST00000526563 574 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AP000619.3-201ENST00000535634 1127 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC090022.1-201ENST00000546569 311 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.13□□□□□ -1.43
EPHB3P54753 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 AC007954.1-201ENST00000554198 494 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 CENPUP2-201ENST00000555897 1186 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AL049872.1-201ENST00000556323 322 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
EPHB3P54753 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.13□□□□□ -1.43
EPHB3P54753 MIR3176-201ENST00000582210 90 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC007448.1-201ENST00000582714 234 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 AC012150.2-201ENST00000621300 544 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 AC109454.4-201ENST00000623411 649 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 MTND1P37-201ENST00000636562 264 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
EPHB3P54753 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.13□□□□□ -1.43
EPHB3P54753 AL355852.1-201ENST00000454081 1771 ntBASIC6.13□□□□□ -1.43
EPHB3P54753 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EPHB3P54753 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 RNY4P24-201ENST00000362735 96 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 XGY1-201ENST00000381172 446 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms