Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLCNKAP51800 RNU6-1257P-201ENST00000384625 110 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 RPL12P9-201ENST00000412942 488 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC013262.1-201ENST00000426710 252 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 COX6CP13-201ENST00000428703 226 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 RBMY2QP-201ENST00000429799 1147 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 AC022022.1-201ENST00000430304 178 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 AP000936.3-201ENST00000438127 255 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC099063.2-201ENST00000446360 662 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 OTX2P1-201ENST00000450956 354 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 RPL10P17-201ENST00000453852 316 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 snoU13.20-201ENST00000459180 104 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 AC091180.1-201ENST00000462104 372 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC010350.1-201ENST00000504908 231 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCNKAP51800 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCNKAP51800 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AL121594.4-201ENST00000556211 1196 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 YWHAZP1-201ENST00000556286 722 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCNKAP51800 MTND1P8-201ENST00000571424 950 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 AC090666.1-201ENST00000578241 445 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 MIR4472-2-201ENST00000582069 67 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 MIR4691-201ENST00000583764 85 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC019131.2-201ENST00000609071 870 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC009452.1-201ENST00000640823 606 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCNKAP51800 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 AC025574.1-201ENST00000554784 1653 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 Z95331.1-201ENST00000623075 23112 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCNKAP51800 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLCNKAP51800 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCNKAP51800 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCNKAP51800 AC007342.7-201ENST00000624610 2337 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 RN7SKP104-201ENST00000362605 328 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 RNU6-252P-201ENST00000363232 107 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 RNA5SP428-201ENST00000365129 132 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 SNORA2.3-201ENST00000383920 135 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 SNORA66-201ENST00000384792 133 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 MIR550A3-201ENST00000390735 95 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AL035079.1-201ENST00000405210 287 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 NCSTNP1-201ENST00000406229 144 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 SNORA11B-201ENST00000408175 129 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 TATDN1P1-201ENST00000414123 891 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 NDUFA5P10-201ENST00000432147 357 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 BX323845.1-201ENST00000432417 179 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 MTCYBP29-201ENST00000436327 1006 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 RPL12P3-201ENST00000440080 396 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 RPL34P20-201ENST00000442771 351 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCNKAP51800 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCNKAP51800 TRY2P-201ENST00000448860 689 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCNKAP51800 SBDSP1-204ENST00000453858 737 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 HIGD1AP8-201ENST00000453927 274 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCNKAP51800 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 TPT1P1-201ENST00000458495 518 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 SETP6-201ENST00000479329 568 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC116562.1-201ENST00000485355 781 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 GTF2IP9-201ENST00000502460 301 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 OR5H3P-201ENST00000502817 919 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCNKAP51800 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCNKAP51800 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCNKAP51800 PCNPP1-201ENST00000552501 511 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCNKAP51800 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCNKAP51800 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCNKAP51800 AC011487.3-201ENST00000593607 453 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC023762.1-201ENST00000603280 584 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC105254.2-201ENST00000603636 436 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC005084.1-201ENST00000605160 304 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCNKAP51800 AL121652.1-201ENST00000608851 448 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC108359.1-201ENST00000616451 1211 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC007275.1-201ENST00000621243 671 ntBASIC4.97□□□□□ -1.61
CLCNKAP51800 AC091932.2-201ENST00000623014 291 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms