Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MIR4660-201ENST00000583549 74 ntBASIC5.57□□□□□ -1.52
CIITAP33076 MIR4737-201ENST00000583979 81 ntBASIC5.57□□□□□ -1.52
CIITAP33076 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.57□□□□□ -1.52
CIITAP33076 AC010424.2-201ENST00000607594 443 ntBASIC5.57□□□□□ -1.52
CIITAP33076 FAM25E-202ENST00000608562 189 ntBASIC5.57□□□□□ -1.52
CIITAP33076 MIR8084-201ENST00000614105 89 ntBASIC5.57□□□□□ -1.52
CIITAP33076 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 AL645927.2-201ENST00000618350 349 ntBASIC5.57□□□□□ -1.52
CIITAP33076 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.57□□□□□ -1.52
CIITAP33076 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.57□□□□□ -1.52
CIITAP33076 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 AC093775.1-201ENST00000624154 1868 ntBASIC5.57□□□□□ -1.52
CIITAP33076 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CIITAP33076 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.57□□□□□ -1.52
CIITAP33076 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.57□□□□□ -1.52
CIITAP33076 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CIITAP33076 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.56□□□□□ -1.52
CIITAP33076 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CIITAP33076 AC008758.3-201ENST00000507003 1829 ntBASIC5.56□□□□□ -1.52
CIITAP33076 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CIITAP33076 AL034403.1-201ENST00000399414 885 ntBASIC5.56□□□□□ -1.52
CIITAP33076 Z86062.1-201ENST00000406773 777 ntBASIC5.56□□□□□ -1.52
CIITAP33076 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.56□□□□□ -1.52
CIITAP33076 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 USP12PY-201ENST00000427677 1064 ntBASIC5.56□□□□□ -1.52
CIITAP33076 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 RPL12P18-201ENST00000437175 325 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC073648.4-201ENST00000442655 781 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 SLC25A18P1-201ENST00000449385 454 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 AL645937.3-201ENST00000453647 936 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC069277.2-201ENST00000454211 432 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.56□□□□□ -1.52
CIITAP33076 AC245028.2-201ENST00000458673 253 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC092324.1-201ENST00000468671 324 ntBASIC5.56□□□□□ -1.52
CIITAP33076 LARP7P4-201ENST00000481075 878 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC116562.1-201ENST00000485355 781 ntBASIC5.56□□□□□ -1.52
CIITAP33076 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CIITAP33076 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.56□□□□□ -1.52
CIITAP33076 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 AP003355.1-201ENST00000518956 587 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC138832.1-201ENST00000522871 556 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC104115.2-201ENST00000523026 687 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC093014.1-201ENST00000548926 724 ntBASIC5.56□□□□□ -1.52
CIITAP33076 MTND1P24-201ENST00000552175 861 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC084759.1-201ENST00000561168 290 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC009852.2-201ENST00000567898 485 ntBASIC5.56□□□□□ -1.52
CIITAP33076 MIR4675-201ENST00000577898 77 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.56□□□□□ -1.52
CIITAP33076 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.56□□□□□ -1.52
CIITAP33076 SNX6P1-201ENST00000601728 1224 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC119501.1-201ENST00000603646 475 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC007497.1-201ENST00000610421 561 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC018926.1-201ENST00000616335 435 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.56□□□□□ -1.52
CIITAP33076 AP000770.2-201ENST00000623694 100 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC073342.3-201ENST00000624211 193 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.56□□□□□ -1.52
CIITAP33076 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.56□□□□□ -1.52
CIITAP33076 AC099654.9-201ENST00000637055 678 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AC073869.10-201ENST00000642016 354 ntBASIC5.56□□□□□ -1.52
CIITAP33076 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.56□□□□□ -1.52
CIITAP33076 AC093849.1-201ENST00000563631 2209 ntBASIC5.56□□□□□ -1.52
CIITAP33076 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.56□□□□□ -1.52
CIITAP33076 SMG1P6-201ENST00000532337 2930 ntBASIC5.56□□□□□ -1.52
CIITAP33076 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CIITAP33076 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CIITAP33076 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CIITAP33076 AC112198.2-201ENST00000426589 6996 ntBASIC5.55□□□□□ -1.52
CIITAP33076 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CIITAP33076 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CIITAP33076 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CIITAP33076 AL024507.1-201ENST00000412741 274 ntBASIC5.55□□□□□ -1.52
CIITAP33076 RANP4-201ENST00000413361 655 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.55□□□□□ -1.52
CIITAP33076 TBCAP2-201ENST00000416175 326 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.55□□□□□ -1.52
CIITAP33076 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.55□□□□□ -1.52
CIITAP33076 AC073052.1-201ENST00000440417 714 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.55□□□□□ -1.52
CIITAP33076 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.55□□□□□ -1.52
CIITAP33076 AURKAPS2-201ENST00000454983 333 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 RPL35AP28-201ENST00000459730 331 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AC105233.1-201ENST00000498840 781 ntBASIC5.55□□□□□ -1.52
CIITAP33076 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.55□□□□□ -1.52
CIITAP33076 AC096571.1-202ENST00000506634 735 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 Y_RNA.719-201ENST00000517156 106 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AC026407.1-201ENST00000518369 204 ntBASIC5.55□□□□□ -1.52
CIITAP33076 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms