Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF1P30408 RNU6-889P-201ENST00000517189 103 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF1P30408 MED28P5-201ENST00000528254 438 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.8□□□□□ -1.48
TM4SF1P30408 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
TM4SF1P30408 AC006130.2-201ENST00000586202 326 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 AC022916.3-201ENST00000592961 742 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 OR7A19P-201ENST00000608051 733 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.8□□□□□ -1.48
TM4SF1P30408 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 DDX6P1-205ENST00000441966 1436 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 AC108467.2-201ENST00000617640 1597 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF1P30408 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF1P30408 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF1P30408 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF1P30408 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 AL442128.2-201ENST00000620246 1824 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TM4SF1P30408 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF1P30408 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
TM4SF1P30408 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF1P30408 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF1P30408 RNU6-1320P-201ENST00000390838 107 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 RNU6-1269P-201ENST00000391139 107 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 BTF3P9-201ENST00000418784 283 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 AC093084.1-201ENST00000424233 687 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF1P30408 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF1P30408 RNU6-599P-201ENST00000459383 107 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 RNU6-1193P-201ENST00000459461 107 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 AC041039.1-201ENST00000485656 536 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF1P30408 AGGF1P9-201ENST00000561884 913 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 LINC00557-201ENST00000563184 1279 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF1P30408 MIR4429-201ENST00000580105 73 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.79□□□□□ -1.48
TM4SF1P30408 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF1P30408 AC245389.1-201ENST00000605141 529 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 AL591034.3-201ENST00000605511 685 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 RNU6-368P-201ENST00000620928 107 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 RNU6-538P-201ENST00000622329 107 ntBASIC5.79□□□□□ -1.48
TM4SF1P30408 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
TM4SF1P30408 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF1P30408 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF1P30408 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TM4SF1P30408 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TM4SF1P30408 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.78□□□□□ -1.48
TM4SF1P30408 RNU1-130P-201ENST00000363930 160 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 RN7SKP224-201ENST00000364140 325 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TM4SF1P30408 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM4SF1P30408 CCNB2P1-201ENST00000399411 1150 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 Z98745.1-201ENST00000402553 494 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.78□□□□□ -1.48
TM4SF1P30408 MTATP6P11-201ENST00000428071 670 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TM4SF1P30408 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.78□□□□□ -1.48
TM4SF1P30408 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.78□□□□□ -1.48
TM4SF1P30408 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.78□□□□□ -1.48
TM4SF1P30408 RPS15AP29-201ENST00000445539 400 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 MTND5P8-201ENST00000449817 1083 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.78□□□□□ -1.48
TM4SF1P30408 AC022034.3-201ENST00000471393 478 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 UQCRHP4-201ENST00000471686 272 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.78□□□□□ -1.48
TM4SF1P30408 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM4SF1P30408 AC005868.1-201ENST00000536421 331 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.78□□□□□ -1.48
TM4SF1P30408 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.78□□□□□ -1.48
TM4SF1P30408 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.78□□□□□ -1.48
TM4SF1P30408 RN7SL176P-201ENST00000580352 264 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 FAM106CP-201ENST00000582212 507 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.78□□□□□ -1.48
TM4SF1P30408 IPO5P1-202ENST00000600039 287 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 AC021422.1-201ENST00000621212 473 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 AP003499.2-201ENST00000624100 483 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 AC034229.5-201ENST00000624258 185 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 OR8B1P-202ENST00000641132 1178 ntBASIC5.78□□□□□ -1.48
TM4SF1P30408 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
TM4SF1P30408 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM4SF1P30408 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TM4SF1P30408 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM4SF1P30408 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM4SF1P30408 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM4SF1P30408 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
TM4SF1P30408 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM4SF1P30408 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM4SF1P30408 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms