Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FTH1P25-201ENST00000447665 469 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 RNA5SP73-201ENST00000516744 108 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.19□□□□□ -1.58
COL4A5P29400 AL360012.1-201ENST00000602813 131 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 AC025175.1-201ENST00000606482 759 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.19□□□□□ -1.58
COL4A5P29400 AC010608.2-201ENST00000624830 470 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 AP005435.3-201ENST00000531260 3198 ntBASIC5.19□□□□□ -1.58
COL4A5P29400 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.19□□□□□ -1.58
COL4A5P29400 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.19□□□□□ -1.58
COL4A5P29400 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.19□□□□□ -1.58
COL4A5P29400 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A5P29400 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
COL4A5P29400 AC092162.3-201ENST00000624511 1624 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 MIR449B-201ENST00000384995 97 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 RN7SKP182-201ENST00000410772 298 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AL356968.2-201ENST00000412769 1257 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.18□□□□□ -1.58
COL4A5P29400 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.18□□□□□ -1.58
COL4A5P29400 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A5P29400 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A5P29400 AL512326.1-201ENST00000443050 721 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.18□□□□□ -1.58
COL4A5P29400 KCTD9P2-201ENST00000512203 1013 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 RNA5SP446-201ENST00000515955 82 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.18□□□□□ -1.58
COL4A5P29400 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL4A5P29400 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL4A5P29400 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A5P29400 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL4A5P29400 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL4A5P29400 RNA5SP119-201ENST00000362715 117 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 RNU6-525P-201ENST00000363685 104 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AP000357.1-201ENST00000409926 1165 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.18□□□□□ -1.58
COL4A5P29400 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A5P29400 CYCSP43-201ENST00000438233 310 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AF213884.1-201ENST00000488102 463 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 DSTNP2-201ENST00000504533 515 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A5P29400 MIR6500-201ENST00000622700 86 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AC091953.5-201ENST00000622919 233 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AL356121.2-201ENST00000624715 780 ntBASIC5.18□□□□□ -1.58
COL4A5P29400 AC073136.1-201ENST00000449426 2884 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 NXPH1-205ENST00000602349 1953 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 RNA5SP372-201ENST00000390836 115 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 FCF1P5-201ENST00000406490 482 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 RN7SKP167-201ENST00000411047 285 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.17□□□□□ -1.58
COL4A5P29400 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.17□□□□□ -1.58
COL4A5P29400 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 RNU6-352P-201ENST00000516908 107 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 HSPE1P5-201ENST00000561489 272 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.17□□□□□ -1.58
COL4A5P29400 MIR5685-201ENST00000579080 79 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 AC107982.3-201ENST00000584957 985 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A5P29400 AC005034.4-201ENST00000603612 899 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A5P29400 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A5P29400 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL4A5P29400 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A5P29400 CASC19-284ENST00000642142 1868 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 AC109446.4-201ENST00000623235 2755 ntBASIC5.17□□□□□ -1.58
COL4A5P29400 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A5P29400 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A5P29400 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL4A5P29400 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A5P29400 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A5P29400 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms