Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC011225.1-201ENST00000457751 369 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AC104164.3-201ENST00000467363 1258 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 MTND6P6-201ENST00000478031 263 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.97□□□□□ -1.61
ABCD3P28288 AC096571.1-202ENST00000506634 735 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
ABCD3P28288 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.97□□□□□ -1.61
ABCD3P28288 SCARNA20.4-201ENST00000516969 131 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 RNA5SP230-201ENST00000517039 122 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 LRRC6P1-201ENST00000532188 885 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 OR8G3P-201ENST00000533406 921 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AC139103.1-201ENST00000534696 1030 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 AC126177.5-201ENST00000549599 178 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.97□□□□□ -1.61
ABCD3P28288 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.97□□□□□ -1.61
ABCD3P28288 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.97□□□□□ -1.61
ABCD3P28288 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 IMMP1LP3-201ENST00000604197 224 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AC026979.4-201ENST00000606555 645 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 AC109309.2-201ENST00000612597 332 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 VN1R74P-201ENST00000613259 503 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AC009318.3-201ENST00000616916 503 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AC109454.4-201ENST00000623411 649 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 AC136428.4-201ENST00000634254 1155 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 CASC19-264ENST00000641912 1184 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ABCD3P28288 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
ABCD3P28288 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
ABCD3P28288 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.61
ABCD3P28288 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ABCD3P28288 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ABCD3P28288 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.96□□□□□ -1.61
ABCD3P28288 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
ABCD3P28288 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.96□□□□□ -1.62
ABCD3P28288 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCD3P28288 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCD3P28288 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCD3P28288 AL512646.1-201ENST00000269395 1077 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ABCD3P28288 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCD3P28288 SNORA70.6-201ENST00000383934 134 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
ABCD3P28288 RNA5SP487-201ENST00000410186 122 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.96□□□□□ -1.62
ABCD3P28288 OR13Z1P-201ENST00000416141 834 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCD3P28288 RPL7L1P9-201ENST00000431298 745 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCD3P28288 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCD3P28288 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCD3P28288 MTND1P33-201ENST00000446251 917 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 MRPL35P4-201ENST00000453682 566 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AL035090.1-201ENST00000454835 332 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 CCDC75P1-201ENST00000469247 791 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 OR2AO1P-201ENST00000476497 403 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC091860.1-201ENST00000505723 432 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCD3P28288 EIF3KP3-201ENST00000514461 639 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AC008494.2-201ENST00000514544 370 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCD3P28288 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.96□□□□□ -1.62
ABCD3P28288 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCD3P28288 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ABCD3P28288 NDUFS5P6-201ENST00000529136 295 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ABCD3P28288 AC107918.3-201ENST00000533272 382 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ABCD3P28288 YWHABP2-201ENST00000540201 713 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC068993.1-201ENST00000546724 589 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.96□□□□□ -1.62
ABCD3P28288 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCD3P28288 NF1P5-201ENST00000588287 448 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AC096947.1-201ENST00000603233 470 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC109583.2-201ENST00000617367 129 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 AP003072.4-201ENST00000624580 310 ntBASIC4.96□□□□□ -1.62
ABCD3P28288 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ABCD3P28288 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms