Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL049839.1-201ENST00000556151 657 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFRAP16234 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFRAP16234 CYCSP40-201ENST00000575927 294 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC005332.5-201ENST00000591222 2919 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC009501.3-201ENST00000605001 1352 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 AC100827.5-201ENST00000615883 426 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AL022401.1-201ENST00000619498 108 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC091953.3-201ENST00000623220 236 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC015908.5-201ENST00000623289 343 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC091948.2-201ENST00000636510 279 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFRAP16234 AC119674.1-212ENST00000641155 993 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
PDGFRAP16234 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFRAP16234 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
PDGFRAP16234 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFRAP16234 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PDGFRAP16234 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
PDGFRAP16234 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFRAP16234 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFRAP16234 AC107068.1-201ENST00000563286 4218 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFRAP16234 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFRAP16234 CTSL3P-202ENST00000412179 788 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 TMBIM7P-201ENST00000418074 855 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 MTND4P24-201ENST00000424002 397 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 AC093414.1-201ENST00000434712 514 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFRAP16234 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFRAP16234 AL691517.1-201ENST00000440833 1235 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFRAP16234 NIP7P2-201ENST00000485801 544 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 OR9N1P-202ENST00000494289 481 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 RN7SL558P-201ENST00000497468 299 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 HMGB3P16-201ENST00000508037 287 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFRAP16234 BNIP3P1-201ENST00000547295 580 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 PCNPP1-201ENST00000552501 511 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 EDDM3DP-201ENST00000554692 434 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 AC009117.1-201ENST00000563948 554 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFRAP16234 AC020910.3-201ENST00000603701 874 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 AL031320.1-201ENST00000604177 357 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 AC005084.1-201ENST00000605160 304 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFRAP16234 AC012414.7-202ENST00000622705 1090 ntBASIC5.09□□□□□ -1.59
PDGFRAP16234 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFRAP16234 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDGFRAP16234 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDGFRAP16234 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
PDGFRAP16234 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PDGFRAP16234 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFRAP16234 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFRAP16234 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFRAP16234 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFRAP16234 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 AC103591.2-201ENST00000265259 766 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 RN7SKP149-201ENST00000363008 344 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFRAP16234 RNU2-50P-201ENST00000410494 143 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 MTATP6P19-201ENST00000413797 659 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 AL139128.1-201ENST00000413921 941 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.08□□□□□ -1.6
PDGFRAP16234 RGS17P1-201ENST00000423358 553 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.08□□□□□ -1.6
PDGFRAP16234 HMGB3P9-201ENST00000441799 583 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFRAP16234 MTND2P25-201ENST00000449028 610 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 SLC25A18P1-201ENST00000449385 454 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.08□□□□□ -1.6
PDGFRAP16234 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFRAP16234 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 RNU6-709P-201ENST00000517257 104 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 MORF4L1P3-201ENST00000525966 950 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.08□□□□□ -1.6
PDGFRAP16234 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFRAP16234 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 MIR4480-201ENST00000582492 71 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFRAP16234 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 AL121932.1-201ENST00000605542 214 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 AL096803.3-201ENST00000609032 532 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 BNIP3P41-202ENST00000616656 861 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFRAP16234 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 AC000374.1-201ENST00000434698 1745 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms