Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC108032.1-201ENST00000416706 207 ntBASIC7.43□□□□□ -1.22
CFTRP13569 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.43□□□□□ -1.22
CFTRP13569 RPL21P91-201ENST00000429231 479 ntBASIC7.43□□□□□ -1.22
CFTRP13569 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.43□□□□□ -1.22
CFTRP13569 AC090686.1-201ENST00000481577 749 ntBASIC7.43□□□□□ -1.22
CFTRP13569 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.43□□□□□ -1.22
CFTRP13569 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.43□□□□□ -1.22
CFTRP13569 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CFTRP13569 AC026403.1-201ENST00000518938 295 ntBASIC7.43□□□□□ -1.22
CFTRP13569 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.43□□□□□ -1.22
CFTRP13569 AC010201.1-201ENST00000605051 540 ntBASIC7.43□□□□□ -1.22
CFTRP13569 AL021997.2-201ENST00000615674 271 ntBASIC7.43□□□□□ -1.22
CFTRP13569 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CFTRP13569 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.42□□□□□ -1.22
CFTRP13569 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CFTRP13569 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CFTRP13569 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CFTRP13569 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CFTRP13569 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CFTRP13569 ADAM5-202ENST00000399789 1942 ntBASIC7.42□□□□□ -1.22
CFTRP13569 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC7.42□□□□□ -1.22
CFTRP13569 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.42□□□□□ -1.22
CFTRP13569 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CFTRP13569 RNU1-20P-201ENST00000363314 162 ntBASIC7.42□□□□□ -1.22
CFTRP13569 RNU1-63P-201ENST00000383902 164 ntBASIC7.42□□□□□ -1.22
CFTRP13569 AL356968.2-201ENST00000412769 1257 ntBASIC7.42□□□□□ -1.22
CFTRP13569 RPEP2-201ENST00000432149 701 ntBASIC7.42□□□□□ -1.22
CFTRP13569 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.42□□□□□ -1.22
CFTRP13569 PPIAP13-201ENST00000434706 478 ntBASIC7.42□□□□□ -1.22
CFTRP13569 CYCSP43-201ENST00000438233 310 ntBASIC7.42□□□□□ -1.22
CFTRP13569 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC7.42□□□□□ -1.22
CFTRP13569 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CFTRP13569 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CFTRP13569 AC020890.1-201ENST00000491837 504 ntBASIC7.42□□□□□ -1.22
CFTRP13569 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CFTRP13569 ATP1B1P1-201ENST00000509767 915 ntBASIC7.42□□□□□ -1.22
CFTRP13569 RN7SKP157-201ENST00000516174 282 ntBASIC7.42□□□□□ -1.22
CFTRP13569 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.42□□□□□ -1.22
CFTRP13569 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CFTRP13569 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CFTRP13569 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
CFTRP13569 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CFTRP13569 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.41□□□□□ -1.22
CFTRP13569 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CFTRP13569 MTCO1P54-201ENST00000430139 712 ntBASIC7.41□□□□□ -1.22
CFTRP13569 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.41□□□□□ -1.22
CFTRP13569 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.41□□□□□ -1.22
CFTRP13569 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.41□□□□□ -1.22
CFTRP13569 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.41□□□□□ -1.22
CFTRP13569 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.41□□□□□ -1.22
CFTRP13569 AC007688.1-201ENST00000475592 759 ntBASIC7.41□□□□□ -1.22
CFTRP13569 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC7.41□□□□□ -1.22
CFTRP13569 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC7.41□□□□□ -1.22
CFTRP13569 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.41□□□□□ -1.22
CFTRP13569 AC007179.3-201ENST00000604976 235 ntBASIC7.41□□□□□ -1.22
CFTRP13569 AC091953.5-201ENST00000622919 233 ntBASIC7.41□□□□□ -1.22
CFTRP13569 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CFTRP13569 CASC19-261ENST00000641853 1638 ntBASIC7.41□□□□□ -1.22
CFTRP13569 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CFTRP13569 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CFTRP13569 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC7.41□□□□□ -1.22
CFTRP13569 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CFTRP13569 AL359922.3-201ENST00000624779 1670 ntBASIC7.4□□□□□ -1.22
CFTRP13569 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.4□□□□□ -1.22
CFTRP13569 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CFTRP13569 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.4□□□□□ -1.22
CFTRP13569 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC7.4□□□□□ -1.22
CFTRP13569 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.4□□□□□ -1.22
CFTRP13569 OR4A2P-201ENST00000527276 913 ntBASIC7.4□□□□□ -1.22
CFTRP13569 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.4□□□□□ -1.22
CFTRP13569 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.4□□□□□ -1.22
CFTRP13569 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC7.4□□□□□ -1.22
CFTRP13569 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CFTRP13569 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CFTRP13569 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.39□□□□□ -1.23
CFTRP13569 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CFTRP13569 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CFTRP13569 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CFTRP13569 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CFTRP13569 RNU11-201ENST00000387069 134 ntBASIC7.39□□□□□ -1.23
CFTRP13569 SERPINA7P1-201ENST00000443077 631 ntBASIC7.39□□□□□ -1.23
CFTRP13569 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.39□□□□□ -1.23
CFTRP13569 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.39□□□□□ -1.23
CFTRP13569 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.39□□□□□ -1.23
CFTRP13569 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.39□□□□□ -1.23
CFTRP13569 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CFTRP13569 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC7.39□□□□□ -1.23
CFTRP13569 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.39□□□□□ -1.23
CFTRP13569 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.39□□□□□ -1.23
CFTRP13569 AC107982.3-201ENST00000584957 985 ntBASIC7.39□□□□□ -1.23
CFTRP13569 AL360012.1-201ENST00000602813 131 ntBASIC7.39□□□□□ -1.23
CFTRP13569 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.39□□□□□ -1.23
CFTRP13569 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.39□□□□□ -1.23
CFTRP13569 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CFTRP13569 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CFTRP13569 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CFTRP13569 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.38□□□□□ -1.23
CFTRP13569 OR11H4-201ENST00000315409 1082 ntBASIC7.38□□□□□ -1.23
CFTRP13569 RNU6-525P-201ENST00000363685 104 ntBASIC7.38□□□□□ -1.23
CFTRP13569 AL080315.1-201ENST00000406055 466 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms