Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
HOXD8P13378 AL117339.4-201ENST00000608335 7063 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HOXD8P13378 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.88□□□□□ -1.31
HOXD8P13378 AP002370.1-201ENST00000528055 1602 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 DCAF13P1-201ENST00000495256 1330 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 RNU6-1090P-201ENST00000364065 94 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 RNA5SP478-201ENST00000364657 115 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 Y_RNA.263-201ENST00000364659 114 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 RNU5E-5P-201ENST00000365379 116 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 RNA5SP284-201ENST00000384547 118 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 SNORA17A-201ENST00000391185 133 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 AL513174.1-201ENST00000423182 629 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 CHEK2P5-201ENST00000423877 246 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 FABP7P1-201ENST00000424004 391 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.88□□□□□ -1.31
HOXD8P13378 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXD8P13378 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXD8P13378 AL391987.1-201ENST00000441025 200 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 OR13K1P-201ENST00000444577 975 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXD8P13378 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXD8P13378 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXD8P13378 VPS25P1-201ENST00000455691 508 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 AC092865.4-201ENST00000477936 615 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 RN7SL273P-201ENST00000481561 299 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 PPIAP19-201ENST00000486414 492 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 AC111193.1-201ENST00000504097 155 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 AC011352.3-201ENST00000505162 593 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXD8P13378 AF131216.2-201ENST00000512316 564 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 SNORD46.2-201ENST00000516021 102 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 SCARNA21.2-201ENST00000516600 166 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 RNU6-430P-201ENST00000517078 107 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXD8P13378 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 BNIP3P8-201ENST00000597863 560 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 AC120349.2-201ENST00000625002 298 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 SNORA17.5-201ENST00000630429 132 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 U6.107-201ENST00000637108 79 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 MIR4302-201ENST00000638058 60 ntBASIC6.88□□□□□ -1.31
HOXD8P13378 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXD8P13378 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXD8P13378 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD8P13378 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD8P13378 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD8P13378 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HOXD8P13378 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD8P13378 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD8P13378 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD8P13378 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
HOXD8P13378 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD8P13378 RN7SKP69-201ENST00000365390 305 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 RN7SKP292-201ENST00000365522 317 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD8P13378 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD8P13378 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD8P13378 Y_RNA.509-201ENST00000384506 99 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 RNA5SP105-201ENST00000391123 113 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 RPL23AP47-201ENST00000408017 460 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD8P13378 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.87□□□□□ -1.31
HOXD8P13378 AC007677.1-201ENST00000445757 515 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 RPL39P6-201ENST00000448289 150 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 COX6CP18-201ENST00000448769 222 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 AC092967.1-201ENST00000449016 481 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 AC104306.1-201ENST00000449702 371 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD8P13378 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXD8P13378 NXT1P1-201ENST00000458481 316 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD8P13378 MTCO1P35-201ENST00000515270 228 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXD8P13378 AP001189.2-201ENST00000527320 189 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HOXD8P13378 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXD8P13378 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXD8P13378 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD8P13378 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD8P13378 MIR3189-201ENST00000578735 73 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 AC060780.3-201ENST00000589464 80 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 AL445222.1-201ENST00000607259 628 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 AL445264.1-201ENST00000621719 171 ntBASIC6.87□□□□□ -1.31
HOXD8P13378 AC010338.1-201ENST00000621823 717 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms