Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TOP2AP11388 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
TOP2AP11388 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TOP2AP11388 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TOP2AP11388 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
TOP2AP11388 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TOP2AP11388 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TOP2AP11388 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.57□□□□□ -1.2
TOP2AP11388 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
TOP2AP11388 ATP5F1P3-201ENST00000397213 657 ntBASIC7.57□□□□□ -1.2
TOP2AP11388 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC7.57□□□□□ -1.2
TOP2AP11388 TCEA1P3-201ENST00000443005 880 ntBASIC7.57□□□□□ -1.2
TOP2AP11388 AL133547.1-201ENST00000448546 220 ntBASIC7.57□□□□□ -1.2
TOP2AP11388 CREM-238ENST00000488741 651 ntTSL 2 BASIC7.57□□□□□ -1.2
TOP2AP11388 ATP1B1P1-201ENST00000509767 915 ntBASIC7.57□□□□□ -1.2
TOP2AP11388 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC7.57□□□□□ -1.2
TOP2AP11388 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.57□□□□□ -1.2
TOP2AP11388 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC7.57□□□□□ -1.2
TOP2AP11388 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TOP2AP11388 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.56□□□□□ -1.2
TOP2AP11388 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TOP2AP11388 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TOP2AP11388 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC7.56□□□□□ -1.2
TOP2AP11388 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
TOP2AP11388 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.56□□□□□ -1.2
TOP2AP11388 OR56B2P-201ENST00000317102 954 ntBASIC7.56□□□□□ -1.2
TOP2AP11388 RNA5SP187-201ENST00000384400 119 ntBASIC7.56□□□□□ -1.2
TOP2AP11388 RN7SKP182-201ENST00000410772 298 ntBASIC7.56□□□□□ -1.2
TOP2AP11388 RPS3AP25-201ENST00000411660 793 ntBASIC7.56□□□□□ -1.2
TOP2AP11388 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.56□□□□□ -1.2
TOP2AP11388 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.56□□□□□ -1.2
TOP2AP11388 AL358232.1-201ENST00000448030 501 ntBASIC7.56□□□□□ -1.2
TOP2AP11388 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
TOP2AP11388 AC090286.3-201ENST00000573133 187 ntBASIC7.56□□□□□ -1.2
TOP2AP11388 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TOP2AP11388 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TOP2AP11388 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TOP2AP11388 LYST-202ENST00000389794 12985 ntTSL 5 BASIC7.56□□□□□ -1.2
TOP2AP11388 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.56□□□□□ -1.2
TOP2AP11388 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TOP2AP11388 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TOP2AP11388 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TOP2AP11388 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TOP2AP11388 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TOP2AP11388 RN7SKP202-201ENST00000410439 330 ntBASIC7.55□□□□□ -1.2
TOP2AP11388 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC7.55□□□□□ -1.2
TOP2AP11388 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TOP2AP11388 RPL35AP15-201ENST00000468042 339 ntBASIC7.55□□□□□ -1.2
TOP2AP11388 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.55□□□□□ -1.2
TOP2AP11388 AL021997.2-201ENST00000615674 271 ntBASIC7.55□□□□□ -1.2
TOP2AP11388 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
TOP2AP11388 AC010608.2-201ENST00000624830 470 ntBASIC7.55□□□□□ -1.2
TOP2AP11388 AC106871.1-201ENST00000568324 3102 ntBASIC7.55□□□□□ -1.2
TOP2AP11388 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TOP2AP11388 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC7.54□□□□□ -1.2
TOP2AP11388 MIR133A2-201ENST00000347538 102 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 RNU1-20P-201ENST00000363314 162 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 AL592291.1-201ENST00000403830 352 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 AP000357.1-201ENST00000409926 1165 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 AC006946.1-201ENST00000429106 328 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.54□□□□□ -1.2
TOP2AP11388 VN1R34P-201ENST00000447387 883 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.54□□□□□ -1.2
TOP2AP11388 KCTD9P2-201ENST00000512203 1013 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TOP2AP11388 IMMP1LP1-201ENST00000605170 488 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.54□□□□□ -1.2
TOP2AP11388 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
TOP2AP11388 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TOP2AP11388 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TOP2AP11388 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC7.54□□□□□ -1.2
TOP2AP11388 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
TOP2AP11388 SLC2A3P1-201ENST00000519666 1451 ntBASIC7.54□□□□□ -1.2
TOP2AP11388 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TOP2AP11388 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
TOP2AP11388 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TOP2AP11388 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.54□□□□□ -1.2
TOP2AP11388 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
TOP2AP11388 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
TOP2AP11388 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.53□□□□□ -1.2
TOP2AP11388 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
TOP2AP11388 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TOP2AP11388 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC7.53□□□□□ -1.2
TOP2AP11388 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC7.53□□□□□ -1.2
TOP2AP11388 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.53□□□□□ -1.2
TOP2AP11388 CCNG2P1-201ENST00000549521 1000 ntBASIC7.53□□□□□ -1.2
TOP2AP11388 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TOP2AP11388 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.53□□□□□ -1.2
TOP2AP11388 AL451086.1-201ENST00000605596 223 ntBASIC7.53□□□□□ -1.2
TOP2AP11388 AC008833.1-201ENST00000611633 691 ntBASIC7.53□□□□□ -1.2
TOP2AP11388 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TOP2AP11388 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TOP2AP11388 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TOP2AP11388 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC7.53□□□□□ -1.2
TOP2AP11388 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.53□□□□□ -1.2
TOP2AP11388 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TOP2AP11388 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC7.53□□□□□ -1.2
TOP2AP11388 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.53□□□□□ -1.2
TOP2AP11388 CGA-201ENST00000369582 729 ntTSL 5 BASIC7.52□□□□□ -1.2
TOP2AP11388 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms