Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TOP1P11387 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TOP1P11387 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.43□□□□□ -1.54
TOP1P11387 HSPA8P17-201ENST00000427029 1382 ntBASIC5.42□□□□□ -1.54
TOP1P11387 BTBD10P1-201ENST00000549824 1352 ntBASIC5.42□□□□□ -1.54
TOP1P11387 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 SCN1A-220ENST00000641603 12506 ntBASIC5.42□□□□□ -1.54
TOP1P11387 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.42□□□□□ -1.54
TOP1P11387 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.42□□□□□ -1.54
TOP1P11387 RPL5P19-201ENST00000404228 893 ntBASIC5.42□□□□□ -1.54
TOP1P11387 FAR2P2-201ENST00000413041 594 ntBASIC5.42□□□□□ -1.54
TOP1P11387 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.42□□□□□ -1.54
TOP1P11387 FAR2P4-202ENST00000425399 584 ntBASIC5.42□□□□□ -1.54
TOP1P11387 RPL23AP1-201ENST00000428990 471 ntBASIC5.42□□□□□ -1.54
TOP1P11387 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.42□□□□□ -1.54
TOP1P11387 YWHAZP2-201ENST00000440317 728 ntBASIC5.42□□□□□ -1.54
TOP1P11387 RPS26P2-201ENST00000440331 348 ntBASIC5.42□□□□□ -1.54
TOP1P11387 ARL2BPP10-201ENST00000446487 531 ntBASIC5.42□□□□□ -1.54
TOP1P11387 AC104651.2-201ENST00000447549 528 ntBASIC5.42□□□□□ -1.54
TOP1P11387 AL162591.2-201ENST00000449634 317 ntBASIC5.42□□□□□ -1.54
TOP1P11387 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.42□□□□□ -1.54
TOP1P11387 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.42□□□□□ -1.54
TOP1P11387 SCARNA10-201ENST00000459255 330 ntBASIC5.42□□□□□ -1.54
TOP1P11387 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.42□□□□□ -1.54
TOP1P11387 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.42□□□□□ -1.54
TOP1P11387 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.42□□□□□ -1.54
TOP1P11387 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.42□□□□□ -1.54
TOP1P11387 AC020915.5-201ENST00000596836 964 ntBASIC5.42□□□□□ -1.54
TOP1P11387 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.42□□□□□ -1.54
TOP1P11387 MIR7641-1-201ENST00000627518 61 ntBASIC5.42□□□□□ -1.54
TOP1P11387 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.42□□□□□ -1.54
TOP1P11387 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TOP1P11387 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.42□□□□□ -1.54
TOP1P11387 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.42□□□□□ -1.54
TOP1P11387 AL592148.3-201ENST00000608771 2646 ntBASIC5.42□□□□□ -1.54
TOP1P11387 AC108467.2-201ENST00000617640 1597 ntBASIC5.42□□□□□ -1.54
TOP1P11387 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.41□□□□□ -1.54
TOP1P11387 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TOP1P11387 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TOP1P11387 AC135352.1-201ENST00000506173 1418 ntBASIC5.41□□□□□ -1.54
TOP1P11387 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.41□□□□□ -1.54
TOP1P11387 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TOP1P11387 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TOP1P11387 AC021146.4-201ENST00000309229 279 ntBASIC5.41□□□□□ -1.54
TOP1P11387 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TOP1P11387 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.41□□□□□ -1.54
TOP1P11387 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TOP1P11387 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TOP1P11387 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.41□□□□□ -1.54
TOP1P11387 AC013470.3-201ENST00000420252 1194 ntBASIC5.41□□□□□ -1.54
TOP1P11387 UQCRBP1-201ENST00000421129 336 ntBASIC5.41□□□□□ -1.54
TOP1P11387 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.41□□□□□ -1.54
TOP1P11387 AC068287.1-201ENST00000430283 295 ntBASIC5.41□□□□□ -1.54
TOP1P11387 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.41□□□□□ -1.54
TOP1P11387 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TOP1P11387 snoU13.1-201ENST00000459157 104 ntBASIC5.41□□□□□ -1.54
TOP1P11387 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.41□□□□□ -1.54
TOP1P11387 AC093890.1-201ENST00000502554 540 ntBASIC5.41□□□□□ -1.54
TOP1P11387 AC098799.3-201ENST00000506095 438 ntBASIC5.41□□□□□ -1.54
TOP1P11387 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.41□□□□□ -1.54
TOP1P11387 AP001781.1-201ENST00000530977 207 ntBASIC5.41□□□□□ -1.54
TOP1P11387 AC209154.1-201ENST00000582156 337 ntBASIC5.41□□□□□ -1.54
TOP1P11387 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.41□□□□□ -1.54
TOP1P11387 AC093765.1-201ENST00000603758 881 ntBASIC5.41□□□□□ -1.54
TOP1P11387 AC100847.1-201ENST00000611316 481 ntBASIC5.41□□□□□ -1.54
TOP1P11387 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.41□□□□□ -1.54
TOP1P11387 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TOP1P11387 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
TOP1P11387 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.41□□□□□ -1.54
TOP1P11387 THAP12P8-201ENST00000447914 2115 ntBASIC5.41□□□□□ -1.54
TOP1P11387 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.4□□□□□ -1.54
TOP1P11387 AL672167.1-203ENST00000641299 2975 ntBASIC5.4□□□□□ -1.54
TOP1P11387 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TOP1P11387 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TOP1P11387 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TOP1P11387 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TOP1P11387 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TOP1P11387 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TOP1P11387 RNU1-83P-201ENST00000363426 164 ntBASIC5.4□□□□□ -1.54
TOP1P11387 RNU1-32P-201ENST00000363937 159 ntBASIC5.4□□□□□ -1.54
TOP1P11387 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TOP1P11387 MIR129-1-201ENST00000384972 72 ntBASIC5.4□□□□□ -1.54
TOP1P11387 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TOP1P11387 CENPIP1-201ENST00000425713 902 ntBASIC5.4□□□□□ -1.54
TOP1P11387 TRGV7-201ENST00000427089 353 ntBASIC5.4□□□□□ -1.54
TOP1P11387 DNAJC19P7-201ENST00000428811 344 ntBASIC5.4□□□□□ -1.54
TOP1P11387 CNOT7P1-201ENST00000429006 852 ntBASIC5.4□□□□□ -1.54
TOP1P11387 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.4□□□□□ -1.54
TOP1P11387 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.4□□□□□ -1.54
TOP1P11387 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.4□□□□□ -1.54
TOP1P11387 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms