Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FCF1P5-201ENST00000406490 482 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC114755.2-201ENST00000413520 361 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 RAB9AP4-201ENST00000415230 609 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 RPS26P13-201ENST00000419030 330 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC006455.6-201ENST00000426192 893 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC104837.2-201ENST00000427236 424 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC073335.1-201ENST00000427776 363 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 GEMIN8P3-201ENST00000445417 720 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 RPL31P44-201ENST00000447680 377 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AURKAPS2-201ENST00000454983 333 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 SEPT7P3-201ENST00000455017 621 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AL356390.1-201ENST00000455684 397 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 OR7L1P-201ENST00000456181 380 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 RPS3AP41-201ENST00000462701 778 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 RN7SL610P-201ENST00000463845 291 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC091917.2-201ENST00000505002 744 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 TRAV11-201ENST00000539512 339 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC125612.1-201ENST00000547580 377 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 EDDM3DP-201ENST00000554692 434 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 RN7SL802P-201ENST00000577858 299 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 MIR5699-201ENST00000578903 90 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC022726.1-201ENST00000587475 207 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC009303.3-201ENST00000591103 736 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC023762.1-201ENST00000603280 584 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 KPNA2P2-201ENST00000419546 1489 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC245100.2-201ENST00000454544 1679 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC067945.1-201ENST00000342609 618 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 RN7SKP149-201ENST00000363008 344 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 SNORA58B-201ENST00000364259 136 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 RNU1-82P-201ENST00000390851 165 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC234781.4-201ENST00000419384 244 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC004074.1-201ENST00000421810 1063 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 VN1R54P-201ENST00000435210 1049 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 RPL7P33-201ENST00000444159 742 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 OR1H1P-201ENST00000448731 937 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 HIGD1AP8-201ENST00000453927 274 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 RPS3AP53-201ENST00000454716 778 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC008676.3-201ENST00000521237 435 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 BRD9P1-201ENST00000529855 560 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AP001880.2-201ENST00000538233 448 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPB1P04440 NCLP2-201ENST00000416078 1462 ntBASIC4.09□□□□□ -1.75
HLA-DPB1P04440 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DPB1P04440 AC132825.1-201ENST00000463573 2247 ntBASIC4.09□□□□□ -1.76
HLA-DPB1P04440 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
HLA-DPB1P04440 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 RNU4-44P-201ENST00000363050 141 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 MIR93-201ENST00000385024 80 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AL078604.1-201ENST00000404609 466 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AC062016.2-201ENST00000420950 676 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 BRWD1P3-201ENST00000428816 390 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AC008072.1-201ENST00000434254 824 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 ARAFP2-201ENST00000440565 559 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 FCF1P7-201ENST00000451185 558 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AC091685.2-201ENST00000454924 864 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AC008410.1-201ENST00000483777 339 ntBASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DPB1P04440 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms