Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNA5SP228-201ENST00000516232 133 ntBASIC4.81□□□□□ -1.64
APOEP02649 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.81□□□□□ -1.64
APOEP02649 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.81□□□□□ -1.64
APOEP02649 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 MIR4330-201ENST00000579077 105 ntBASIC4.81□□□□□ -1.64
APOEP02649 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.81□□□□□ -1.64
APOEP02649 AC073091.2-201ENST00000603205 907 ntBASIC4.81□□□□□ -1.64
APOEP02649 AC009704.2-201ENST00000618739 483 ntBASIC4.81□□□□□ -1.64
APOEP02649 AC005086.4-201ENST00000623065 213 ntBASIC4.81□□□□□ -1.64
APOEP02649 AL359757.1-201ENST00000623176 255 ntBASIC4.81□□□□□ -1.64
APOEP02649 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.81□□□□□ -1.64
APOEP02649 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
APOEP02649 DDX18P4-201ENST00000511690 1966 ntBASIC4.81□□□□□ -1.64
APOEP02649 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.81□□□□□ -1.64
APOEP02649 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
APOEP02649 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOEP02649 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.8□□□□□ -1.64
APOEP02649 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOEP02649 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
APOEP02649 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.8□□□□□ -1.64
APOEP02649 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOEP02649 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOEP02649 AC108751.5-201ENST00000492880 1336 ntBASIC4.8□□□□□ -1.64
APOEP02649 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOEP02649 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOEP02649 OR4K15-201ENST00000305051 1216 ntBASIC4.8□□□□□ -1.64
APOEP02649 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
APOEP02649 RNA5SP505-201ENST00000364748 108 ntBASIC4.8□□□□□ -1.64
APOEP02649 SNORA70F-201ENST00000384142 135 ntBASIC4.8□□□□□ -1.64
APOEP02649 RPS3AP23-201ENST00000401762 784 ntBASIC4.8□□□□□ -1.64
APOEP02649 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
APOEP02649 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.8□□□□□ -1.64
APOEP02649 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.8□□□□□ -1.64
APOEP02649 AC069213.2-201ENST00000420238 366 ntBASIC4.8□□□□□ -1.64
APOEP02649 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.8□□□□□ -1.64
APOEP02649 AC245028.1-201ENST00000423259 256 ntBASIC4.8□□□□□ -1.64
APOEP02649 ARL2BPP10-201ENST00000446487 531 ntBASIC4.8□□□□□ -1.64
APOEP02649 NDUFA12P1-201ENST00000455914 406 ntBASIC4.8□□□□□ -1.64
APOEP02649 RN7SL738P-201ENST00000470264 297 ntBASIC4.8□□□□□ -1.64
APOEP02649 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.8□□□□□ -1.64
APOEP02649 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.8□□□□□ -1.64
APOEP02649 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.8□□□□□ -1.64
APOEP02649 AC007016.1-201ENST00000512110 244 ntBASIC4.8□□□□□ -1.64
APOEP02649 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.8□□□□□ -1.64
APOEP02649 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.8□□□□□ -1.64
APOEP02649 OR5AN2P-201ENST00000534535 896 ntBASIC4.8□□□□□ -1.64
APOEP02649 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
APOEP02649 AC234771.5-201ENST00000600161 514 ntBASIC4.8□□□□□ -1.64
APOEP02649 AC005520.3-201ENST00000602874 370 ntBASIC4.8□□□□□ -1.64
APOEP02649 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOEP02649 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.8□□□□□ -1.64
APOEP02649 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOEP02649 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOEP02649 DHX40P1-201ENST00000588725 1412 ntBASIC4.8□□□□□ -1.64
APOEP02649 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOEP02649 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
APOEP02649 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.79□□□□□ -1.64
APOEP02649 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
APOEP02649 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOEP02649 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOEP02649 AC018529.3-201ENST00000624212 2254 ntBASIC4.79□□□□□ -1.64
APOEP02649 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOEP02649 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
APOEP02649 SNORD113.2-201ENST00000364166 89 ntBASIC4.79□□□□□ -1.64
APOEP02649 MIR137-201ENST00000385223 102 ntBASIC4.79□□□□□ -1.64
APOEP02649 RPL26P29-201ENST00000415623 438 ntBASIC4.79□□□□□ -1.64
APOEP02649 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 AC092570.3-201ENST00000420113 693 ntBASIC4.79□□□□□ -1.64
APOEP02649 RPS12P5-201ENST00000423449 371 ntBASIC4.79□□□□□ -1.64
APOEP02649 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.79□□□□□ -1.64
APOEP02649 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.79□□□□□ -1.64
APOEP02649 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.79□□□□□ -1.64
APOEP02649 AC015912.2-201ENST00000571053 181 ntBASIC4.79□□□□□ -1.64
APOEP02649 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 AC119501.1-201ENST00000603646 475 ntBASIC4.79□□□□□ -1.64
APOEP02649 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.79□□□□□ -1.64
APOEP02649 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
APOEP02649 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.79□□□□□ -1.64
APOEP02649 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOEP02649 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.79□□□□□ -1.64
APOEP02649 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
APOEP02649 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOEP02649 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOEP02649 AC135352.1-201ENST00000506173 1418 ntBASIC4.79□□□□□ -1.64
APOEP02649 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.79□□□□□ -1.64
APOEP02649 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOEP02649 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOEP02649 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOEP02649 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
APOEP02649 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.79□□□□□ -1.64
APOEP02649 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms