Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL2A1P02458 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL2A1P02458 MIR383-201ENST00000362257 73 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL2A1P02458 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 RCC2P2-201ENST00000422174 918 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 SEC63P1-201ENST00000425785 1258 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 RPL21P91-201ENST00000429231 479 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.26□□□□□ -1.57
COL2A1P02458 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 RPL23AP52-201ENST00000439311 478 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 RWDD4P1-201ENST00000488019 565 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AC069304.1-201ENST00000491593 704 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
COL2A1P02458 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.26□□□□□ -1.57
COL2A1P02458 SCARNA13-201ENST00000516672 275 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AL591034.3-201ENST00000605511 685 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 AC023043.4-201ENST00000612081 449 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 MIR6075-201ENST00000620782 95 ntBASIC5.26□□□□□ -1.57
COL2A1P02458 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL2A1P02458 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
COL2A1P02458 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.25□□□□□ -1.57
COL2A1P02458 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL2A1P02458 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL2A1P02458 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.25□□□□□ -1.57
COL2A1P02458 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
COL2A1P02458 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 SNORD46.1-201ENST00000364139 104 ntBASIC5.25□□□□□ -1.57
COL2A1P02458 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.25□□□□□ -1.57
COL2A1P02458 AL022722.2-201ENST00000402519 180 ntBASIC5.25□□□□□ -1.57
COL2A1P02458 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.25□□□□□ -1.57
COL2A1P02458 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.25□□□□□ -1.57
COL2A1P02458 AC012671.1-201ENST00000451912 203 ntBASIC5.25□□□□□ -1.57
COL2A1P02458 RPL7L1P8-201ENST00000469911 741 ntBASIC5.25□□□□□ -1.57
COL2A1P02458 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.25□□□□□ -1.57
COL2A1P02458 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.25□□□□□ -1.57
COL2A1P02458 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.25□□□□□ -1.57
COL2A1P02458 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.25□□□□□ -1.57
COL2A1P02458 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.25□□□□□ -1.57
COL2A1P02458 AC025884.1-201ENST00000556034 378 ntBASIC5.25□□□□□ -1.57
COL2A1P02458 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.25□□□□□ -1.57
COL2A1P02458 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
COL2A1P02458 AL139254.3-201ENST00000641097 674 ntBASIC5.25□□□□□ -1.57
COL2A1P02458 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL2A1P02458 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
COL2A1P02458 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL2A1P02458 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL2A1P02458 OR56B2P-201ENST00000317102 954 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 AL121657.1-201ENST00000327215 531 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 RNU1-132P-201ENST00000364300 164 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 RPS26P8-201ENST00000393490 348 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 OR13Z1P-201ENST00000416141 834 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 RRM2P4-201ENST00000441721 562 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 HSFY6P-201ENST00000445573 403 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 NUTF2P3-201ENST00000448540 384 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 DEFB109A-201ENST00000482450 265 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.24□□□□□ -1.57
COL2A1P02458 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.24□□□□□ -1.57
COL2A1P02458 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.24□□□□□ -1.57
COL2A1P02458 AL359219.2-201ENST00000555184 348 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 AC009712.1-201ENST00000564938 316 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 SNX18P1Y-201ENST00000616231 511 ntBASIC5.24□□□□□ -1.57
COL2A1P02458 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL2A1P02458 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.24□□□□□ -1.57
COL2A1P02458 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL2A1P02458 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.24□□□□□ -1.57
COL2A1P02458 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL2A1P02458 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL2A1P02458 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL2A1P02458 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL2A1P02458 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 AC105074.1-201ENST00000623380 3095 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 AL627171.1-201ENST00000618845 1308 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.23□□□□□ -1.57
COL2A1P02458 MIR331-201ENST00000362302 94 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 AL672167.2-201ENST00000377164 879 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.23□□□□□ -1.57
COL2A1P02458 AC062016.2-201ENST00000420950 676 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 RPS6P14-201ENST00000425165 719 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
COL2A1P02458 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 AC017099.1-201ENST00000448261 1028 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 SEPT14P1-201ENST00000458703 648 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 RNU6-775P-201ENST00000459318 96 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 RPS20P4-201ENST00000461659 355 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms