Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.13□□□□□ -1.59
SMAD6O43541 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.13□□□□□ -1.59
SMAD6O43541 RPL35AP28-201ENST00000459730 331 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC231760.1-201ENST00000498002 260 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 MRPS33P2-201ENST00000507850 322 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.13□□□□□ -1.59
SMAD6O43541 SNORA76.2-201ENST00000517095 137 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.13□□□□□ -1.59
SMAD6O43541 MTCO1P47-201ENST00000523889 1271 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AP000676.2-201ENST00000529711 301 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC005000.1-201ENST00000536192 288 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 AL359219.2-201ENST00000555184 348 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 SETP1-201ENST00000556014 845 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.13□□□□□ -1.59
SMAD6O43541 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.13□□□□□ -1.59
SMAD6O43541 AC008088.1-201ENST00000580993 280 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AP005262.1-201ENST00000582646 997 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.13□□□□□ -1.59
SMAD6O43541 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.13□□□□□ -1.59
SMAD6O43541 AC245036.5-201ENST00000596330 847 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC110760.3-201ENST00000598794 467 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AL022161.1-201ENST00000604390 213 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.13□□□□□ -1.59
SMAD6O43541 AC090116.1-201ENST00000615679 446 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 AC017104.5-201ENST00000637647 639 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 AC132825.7-201ENST00000638744 335 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 IRF5P1-201ENST00000504852 2164 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 CASC19-221ENST00000641309 1382 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.13□□□□□ -1.59
SMAD6O43541 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.13□□□□□ -1.59
SMAD6O43541 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.13□□□□□ -1.59
SMAD6O43541 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.13□□□□□ -1.59
SMAD6O43541 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMAD6O43541 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMAD6O43541 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SMAD6O43541 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMAD6O43541 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SMAD6O43541 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMAD6O43541 SNORD51.1-201ENST00000365405 77 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SMAD6O43541 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SMAD6O43541 OR51B3P-201ENST00000412287 913 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.12□□□□□ -1.59
SMAD6O43541 RPL12P43-201ENST00000420608 499 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 OR2AM1P-201ENST00000422137 422 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC046176.1-201ENST00000435260 1170 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 AC022431.1-201ENST00000450941 438 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 HIGD1AP8-201ENST00000453927 274 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC098976.1-201ENST00000513014 541 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 AC012339.2-201ENST00000523996 453 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 OSBPL9P3-201ENST00000534523 595 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 AC008033.2-201ENST00000542626 177 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.12□□□□□ -1.59
SMAD6O43541 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.12□□□□□ -1.59
SMAD6O43541 NMNAT1P1-201ENST00000554095 876 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC023824.3-201ENST00000569003 562 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 AL450336.1-201ENST00000605180 586 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 AP003485.2-201ENST00000623636 610 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 AL353662.3-201ENST00000625131 237 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMAD6O43541 MFSD8-213ENST00000641134 1327 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 AC011755.1-201ENST00000623763 2049 ntBASIC5.12□□□□□ -1.59
SMAD6O43541 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
SMAD6O43541 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SMAD6O43541 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.12□□□□□ -1.59
SMAD6O43541 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SMAD6O43541 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SMAD6O43541 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SMAD6O43541 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.11□□□□□ -1.59
SMAD6O43541 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SMAD6O43541 SCARNA15-201ENST00000607520 4325 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SMAD6O43541 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms