Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.04□□□□□ -1.6
MSH4O15457 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.04□□□□□ -1.6
MSH4O15457 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.04□□□□□ -1.6
MSH4O15457 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.04□□□□□ -1.6
MSH4O15457 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.04□□□□□ -1.6
MSH4O15457 MIR4277-201ENST00000578298 84 ntBASIC5.04□□□□□ -1.6
MSH4O15457 AF230666.2-201ENST00000602328 725 ntBASIC5.04□□□□□ -1.6
MSH4O15457 AC090948.1-201ENST00000607464 549 ntBASIC5.04□□□□□ -1.6
MSH4O15457 AP002360.3-201ENST00000607673 710 ntBASIC5.04□□□□□ -1.6
MSH4O15457 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
MSH4O15457 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.04□□□□□ -1.6
MSH4O15457 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
MSH4O15457 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.04□□□□□ -1.6
MSH4O15457 HSPD1P14-201ENST00000432666 1618 ntBASIC5.04□□□□□ -1.6
MSH4O15457 AC093849.1-201ENST00000563631 2209 ntBASIC5.04□□□□□ -1.6
MSH4O15457 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.04□□□□□ -1.6
MSH4O15457 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
MSH4O15457 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MSH4O15457 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
MSH4O15457 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.03□□□□□ -1.6
MSH4O15457 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.03□□□□□ -1.6
MSH4O15457 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.03□□□□□ -1.6
MSH4O15457 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 AC008033.1-201ENST00000216407 1162 ntBASIC5.03□□□□□ -1.6
MSH4O15457 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.03□□□□□ -1.6
MSH4O15457 AL592293.2-201ENST00000422292 996 ntBASIC5.03□□□□□ -1.6
MSH4O15457 RPL12P34-201ENST00000424532 479 ntBASIC5.03□□□□□ -1.6
MSH4O15457 NIPA2P1-201ENST00000426223 976 ntBASIC5.03□□□□□ -1.6
MSH4O15457 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.03□□□□□ -1.6
MSH4O15457 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 RPS27AP17-201ENST00000463344 455 ntBASIC5.03□□□□□ -1.6
MSH4O15457 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.03□□□□□ -1.6
MSH4O15457 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.03□□□□□ -1.6
MSH4O15457 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.03□□□□□ -1.6
MSH4O15457 AC009643.1-201ENST00000532030 391 ntBASIC5.03□□□□□ -1.6
MSH4O15457 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.03□□□□□ -1.6
MSH4O15457 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.03□□□□□ -1.6
MSH4O15457 AC008966.2-201ENST00000606157 453 ntBASIC5.03□□□□□ -1.6
MSH4O15457 AL023583.1-201ENST00000607518 1143 ntBASIC5.03□□□□□ -1.6
MSH4O15457 MIR378J-201ENST00000611988 109 ntBASIC5.03□□□□□ -1.6
MSH4O15457 NF1P10-201ENST00000613227 742 ntBASIC5.03□□□□□ -1.6
MSH4O15457 AC022106.2-201ENST00000620114 757 ntBASIC5.03□□□□□ -1.6
MSH4O15457 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.03□□□□□ -1.6
MSH4O15457 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.03□□□□□ -1.6
MSH4O15457 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.03□□□□□ -1.6
MSH4O15457 AC092111.2-201ENST00000611627 1414 ntBASIC5.03□□□□□ -1.6
MSH4O15457 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
MSH4O15457 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.03□□□□□ -1.6
MSH4O15457 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MSH4O15457 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
MSH4O15457 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
MSH4O15457 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MSH4O15457 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MSH4O15457 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MSH4O15457 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MSH4O15457 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.02□□□□□ -1.61
MSH4O15457 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MSH4O15457 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
MSH4O15457 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MSH4O15457 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.02□□□□□ -1.61
MSH4O15457 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.02□□□□□ -1.61
MSH4O15457 MIR1271-201ENST00000408537 86 ntBASIC5.02□□□□□ -1.61
MSH4O15457 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.02□□□□□ -1.61
MSH4O15457 UBE2V2P1-201ENST00000434717 398 ntBASIC5.02□□□□□ -1.61
MSH4O15457 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.02□□□□□ -1.61
MSH4O15457 UBE2V1P3-201ENST00000439651 417 ntBASIC5.02□□□□□ -1.61
MSH4O15457 FHP1-201ENST00000442741 703 ntBASIC5.02□□□□□ -1.61
MSH4O15457 EIF2S2P2-201ENST00000447161 982 ntBASIC5.02□□□□□ -1.61
MSH4O15457 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.02□□□□□ -1.61
MSH4O15457 RPL23AP24-201ENST00000458203 385 ntBASIC5.02□□□□□ -1.61
MSH4O15457 AC011276.1-201ENST00000469688 323 ntBASIC5.02□□□□□ -1.61
MSH4O15457 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.02□□□□□ -1.61
MSH4O15457 RN7SL860P-201ENST00000473738 223 ntBASIC5.02□□□□□ -1.61
MSH4O15457 NIP7P2-201ENST00000485801 544 ntBASIC5.02□□□□□ -1.61
MSH4O15457 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.02□□□□□ -1.61
MSH4O15457 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
MSH4O15457 RN7SKP46-201ENST00000515942 234 ntBASIC5.02□□□□□ -1.61
MSH4O15457 RNU6-513P-201ENST00000516104 104 ntBASIC5.02□□□□□ -1.61
MSH4O15457 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MSH4O15457 HMGB2P1-201ENST00000591146 634 ntBASIC5.02□□□□□ -1.61
MSH4O15457 AL035461.2-201ENST00000619201 524 ntBASIC5.02□□□□□ -1.61
MSH4O15457 AC091905.2-201ENST00000623143 306 ntBASIC5.02□□□□□ -1.61
MSH4O15457 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.02□□□□□ -1.61
MSH4O15457 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MSH4O15457 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MSH4O15457 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.02□□□□□ -1.61
MSH4O15457 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
MSH4O15457 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
MSH4O15457 MTCO1P22-201ENST00000604619 1360 ntBASIC5.02□□□□□ -1.61
MSH4O15457 A2MP1-204ENST00000566278 4130 ntBASIC5.02□□□□□ -1.61
MSH4O15457 AC011503.2-201ENST00000594230 1500 ntBASIC5.02□□□□□ -1.61
MSH4O15457 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MSH4O15457 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.02□□□□□ -1.61
MSH4O15457 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms