Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SLC25A18P1-201ENST00000449385 454 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 RPL23AP56-201ENST00000460778 453 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 RPL21P6-201ENST00000479171 504 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 METTL15P1-201ENST00000481421 1045 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 AC093663.2-201ENST00000484625 313 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC28A1O00337 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC28A1O00337 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC28A1O00337 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC28A1O00337 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC28A1O00337 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC28A1O00337 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC28A1O00337 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SLC28A1O00337 FKBP1BP1-201ENST00000553366 325 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 AC068714.1-201ENST00000559623 800 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC28A1O00337 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC28A1O00337 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC28A1O00337 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC28A1O00337 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC28A1O00337 AC040174.2-201ENST00000602701 465 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 AC015849.2-201ENST00000605738 409 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 COX6CP4-201ENST00000605798 228 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 AC009163.6-201ENST00000612367 342 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 EIF3FP1-201ENST00000613970 806 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 AC011472.4-201ENST00000615848 491 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 LINC01739-205ENST00000641890 573 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC28A1O00337 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SLC28A1O00337 Z95327.2-201ENST00000414579 1873 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC28A1O00337 TLK1P1-201ENST00000456760 2440 ntBASIC4.62□□□□□ -1.67
SLC28A1O00337 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC28A1O00337 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SLC28A1O00337 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC28A1O00337 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC28A1O00337 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC28A1O00337 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SLC28A1O00337 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC28A1O00337 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC28A1O00337 VDAC2P1-201ENST00000399358 958 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 LINC00993-201ENST00000420453 540 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 FABP7P1-201ENST00000424004 391 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC28A1O00337 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC28A1O00337 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC28A1O00337 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC28A1O00337 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC28A1O00337 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC28A1O00337 AC107398.1-201ENST00000486904 505 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 AC140172.1-201ENST00000502928 141 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 RNA5SP464-201ENST00000516251 108 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 RNU6-1004P-201ENST00000516584 111 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 RN7SKP66-201ENST00000516681 231 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 RNA5SP392-201ENST00000516905 112 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC28A1O00337 AC087272.1-201ENST00000523624 533 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC28A1O00337 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC28A1O00337 CKS1BP1-201ENST00000555221 240 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 AC093249.4-201ENST00000564755 259 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 MIR3176-201ENST00000582210 90 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC28A1O00337 AC006116.3-201ENST00000592968 361 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 MIR6768-201ENST00000610734 72 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC28A1O00337 AL163152.1-201ENST00000642001 374 ntBASIC4.61□□□□□ -1.67
SLC28A1O00337 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC28A1O00337 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC28A1O00337 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SLC28A1O00337 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC28A1O00337 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SLC28A1O00337 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.6□□□□□ -1.67
SLC28A1O00337 ZFRP1-201ENST00000457579 2970 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
SLC28A1O00337 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.6□□□□□ -1.67
SLC28A1O00337 RPS27AP11-201ENST00000402798 447 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 ARL4AP5-201ENST00000404372 599 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 RN7SKP247-201ENST00000411094 308 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 AC114755.2-201ENST00000413520 361 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC099336.2-201ENST00000422457 254 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC28A1O00337 RPL7P11-201ENST00000437586 658 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC28A1O00337 Z80107.2-201ENST00000445127 392 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC28A1O00337 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 HMGB1P5-202ENST00000451497 985 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms