Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 SRRM1P3-201ENST00000426911 2678 ntBASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHKB-CPT1BH3BT56 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AL133383.2-201ENST00000622958 2336 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 OR11H4-201ENST00000315409 1082 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 RNA5SP500-201ENST00000364486 119 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR600-201ENST00000385007 98 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AL136131.1-201ENST00000406079 803 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 FCF1P5-201ENST00000406490 482 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 RPS12P23-201ENST00000419579 400 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 FAR2P4-202ENST00000425399 584 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 RPL23AP1-201ENST00000428990 471 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 MTCYBP31-201ENST00000438855 1122 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AL353803.3-201ENST00000444641 335 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 YWHAQP9-201ENST00000445891 512 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC009963.3-201ENST00000458090 486 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC011476.1-201ENST00000466725 307 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 RPS27P20-201ENST00000492051 246 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010409.2-201ENST00000505780 478 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 SCARNA21.2-201ENST00000516600 166 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 IGKV3D-25-201ENST00000519599 235 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 SMARCE1P4-201ENST00000523647 241 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC012339.2-201ENST00000523996 453 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 OR5D17P-201ENST00000531492 978 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AL121839.1-201ENST00000556233 1185 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC107958.1-201ENST00000556576 290 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR4458-201ENST00000578872 75 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC020910.2-201ENST00000603635 610 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AP003392.5-201ENST00000607857 415 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC108673.3-201ENST00000609183 335 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC068726.1-201ENST00000610993 341 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AL627230.1-201ENST00000613077 211 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC008121.2-201ENST00000614647 523 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC103564.3-201ENST00000621194 220 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC089999.3-201ENST00000622440 577 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010325.3-201ENST00000641084 394 ntBASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHKB-CPT1BH3BT56 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 ALB-219ENST00000621085 1418 ntTSL 5 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF826P-207ENST00000622273 1910 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SKP240-201ENST00000410583 375 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 HMGN1P20-201ENST00000411849 300 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AL161742.1-201ENST00000418154 584 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 RPS15AP6-201ENST00000420703 385 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 IGKV1OR9-1-201ENST00000424370 284 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC073069.1-201ENST00000428657 441 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms