Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 RNU2-30P-201ENST00000516209 141 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 RN7SL652P-201ENST00000577769 300 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 MIR5699-201ENST00000578903 90 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL451049.1-201ENST00000608672 497 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC093775.1-201ENST00000624154 1868 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.59□□□□□ -1.68
TMX2-CTNND1H3BSU7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
TMX2-CTNND1H3BSU7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.59□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL442639.1-201ENST00000625030 1899 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC120338.1-201ENST00000625074 1541 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC008549.2-201ENST00000333482 706 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC068538.1-201ENST00000376856 336 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 SNORA79B-201ENST00000410557 148 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 CBX1P3-201ENST00000413296 527 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC023141.6-201ENST00000429418 337 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 CEACAMP6-201ENST00000452007 574 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC009963.2-201ENST00000453431 138 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC093166.2-201ENST00000455969 1017 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC005008.1-201ENST00000456151 612 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPS17P2-201ENST00000461663 408 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPS4XP18-201ENST00000495480 763 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 RN7SL558P-201ENST00000497468 299 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 TCP11X3P-202ENST00000514289 1254 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 RNA5SP360-201ENST00000516555 118 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL049839.1-201ENST00000556151 657 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC116553.2-201ENST00000564203 463 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AP005019.3-201ENST00000620418 560 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AP001005.3-201ENST00000622049 129 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC006840.1-201ENST00000623069 542 ntBASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMX2-CTNND1H3BSU7 NAMPTP1-201ENST00000440465 2514 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL137100.1-201ENST00000556703 1620 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 ZNF137P-201ENST00000456718 1920 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPS24P12-201ENST00000402084 394 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AP000580.1-201ENST00000404439 358 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL591848.1-201ENST00000413092 322 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPL12P34-201ENST00000424532 479 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 CYCSP11-201ENST00000436426 315 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPS6P2-201ENST00000454208 705 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPL23AP37-201ENST00000479658 549 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 RN7SKP122-201ENST00000515923 296 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 RNA5SP392-201ENST00000516905 112 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AP002981.1-201ENST00000517692 975 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 OR5M2P-201ENST00000529003 936 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC008126.1-201ENST00000549019 480 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPL12P25-202ENST00000598100 674 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC233280.2-201ENST00000603917 1070 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC009704.2-201ENST00000618739 483 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC010809.3-201ENST00000621310 641 ntBASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms