Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRAV27A0A087WT01 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 RN7SKP247-201ENST00000411094 308 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 GSTM3P2-201ENST00000412746 530 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 OR13Z1P-201ENST00000416141 834 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 RPS23P10-201ENST00000416185 486 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AC234781.4-201ENST00000419384 244 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 EIF4EP1-201ENST00000422311 642 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AC010326.1-201ENST00000462726 602 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AL358913.1-201ENST00000554342 121 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 MIR4270-201ENST00000581799 70 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 RN7SL690P-201ENST00000582087 240 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AC079298.2-201ENST00000623885 459 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AL049536.1-201ENST00000625043 744 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AL355480.1-201ENST00000629041 99 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 AC091046.3-201ENST00000631455 1574 ntBASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
TRAV27A0A087WT01 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 MTHFD2P5-201ENST00000320415 844 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 SNORD113.2-201ENST00000364166 89 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 BMS1P3-201ENST00000372011 932 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 GLULP6-201ENST00000399502 913 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 UQCRBP1-201ENST00000421129 336 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 RPL7AP25-201ENST00000423357 805 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 HLA-N-201ENST00000437516 135 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 RPL7P33-201ENST00000444159 742 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC073587.1-201ENST00000447093 876 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AL591363.1-201ENST00000450091 483 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 ABCF2P2-201ENST00000450549 296 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AP000942.1-201ENST00000463969 747 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 RPL35AP15-201ENST00000468042 339 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 RPL5P16-201ENST00000471467 790 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 RPL32P9-201ENST00000487963 407 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 ATP1B1P1-201ENST00000509767 915 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 IGKV1-32-201ENST00000519290 311 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 PHBP17-201ENST00000528576 541 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC008147.3-201ENST00000548666 354 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC011270.1-201ENST00000558606 583 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC069061.3-201ENST00000582254 823 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC100847.1-201ENST00000611316 481 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 FP325313.1-201ENST00000638228 703 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 AC027228.2-201ENST00000567141 2154 ntBASIC3.95□□□□□ -1.78
TRAV27A0A087WT01 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 RNU1-130P-201ENST00000363930 160 ntBASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 SNORA70F-201ENST00000384142 135 ntBASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRAV27A0A087WT01 SNORD66.1-201ENST00000391230 76 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms