Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm4968-201ENSMUST00000071458 858 ntBASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cx3cr1Q9Z0D9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Gm13148-201ENSMUST00000118892 745 ntBASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cx3cr1Q9Z0D9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Cx3cr1Q9Z0D9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Gm2559-201ENSMUST00000201323 363 ntBASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cx3cr1Q9Z0D9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms