Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 AC024257.2-201ENST00000549699 147 ntBASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 AL035685.1-201ENST00000636663 812 ntBASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 AC135050.7-201ENST00000624508 2218 ntBASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 AC091799.1-201ENST00000422823 811 ntBASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 SLC7A5P2-201ENST00000553010 536 ntBASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 AC006333.2-201ENST00000607957 2099 ntBASIC16.03■□□□□ 0.16
LSM5Q9Y4Y9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 AP001271.2-201ENST00000624018 1556 ntBASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 AC010141.2-201ENST00000452426 721 ntBASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 AL136162.1-201ENST00000607711 1078 ntBASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 AL358852.1-201ENST00000623174 1268 ntBASIC16.02■□□□□ 0.16
LSM5Q9Y4Y9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 KRT16P6-202ENST00000425692 1426 ntBASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.02■□□□□ 0.15
LSM5Q9Y4Y9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 AC105265.2-201ENST00000467189 838 ntBASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM5Q9Y4Y9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms