Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 MMP23A-201ENST00000234610 1017 ntBASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 AC087499.1-201ENST00000418141 1075 ntBASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 RCC2P6-201ENST00000526625 1557 ntBASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 AP000525.1-201ENST00000608286 694 ntBASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 DGCR10-201ENST00000609839 495 ntBASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN1Q9UMX0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 AC004951.3-201ENST00000418645 1148 ntBASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 Z85996.1-201ENST00000494644 937 ntBASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.9■□□□□ 0.94
UBQLN1Q9UMX0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.89■□□□□ 0.94
UBQLN1Q9UMX0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UBQLN1Q9UMX0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.89■□□□□ 0.94
UBQLN1Q9UMX0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 AC011298.2-201ENST00000617989 482 ntBASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 AC130371.2-201ENST00000619443 611 ntBASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN1Q9UMX0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.88■□□□□ 0.93
UBQLN1Q9UMX0 FITM1-202ENST00000559294 800 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms