Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 AC073648.2-201ENST00000510116 352 ntBASIC18.19■□□□□ 0.5
CHD8Q9HCK8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 AC093525.10-201ENST00000625130 1569 ntBASIC18.19■□□□□ 0.5
CHD8Q9HCK8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 CYMP-203ENST00000474680 1263 ntBASIC18.19■□□□□ 0.5
CHD8Q9HCK8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 AKR1C7P-201ENST00000305623 895 ntBASIC18.18■□□□□ 0.5
CHD8Q9HCK8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 TP73-AS1-207ENST00000624167 988 ntBASIC18.18■□□□□ 0.5
CHD8Q9HCK8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.18■□□□□ 0.5
CHD8Q9HCK8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 KRT8P20-201ENST00000423953 1409 ntBASIC18.17■□□□□ 0.5
CHD8Q9HCK8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 AF238378.1-201ENST00000526806 358 ntBASIC18.17■□□□□ 0.5
CHD8Q9HCK8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 LINC00265-3P-201ENST00000447588 903 ntBASIC18.17■□□□□ 0.5
CHD8Q9HCK8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD8Q9HCK8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 AC134684.3-201ENST00000641758 218 ntBASIC18.16■□□□□ 0.5
CHD8Q9HCK8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD8Q9HCK8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 FAM197Y8-203ENST00000450145 560 ntBASIC18.15■□□□□ 0.5
CHD8Q9HCK8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 AC148477.8-201ENST00000624298 468 ntBASIC18.15■□□□□ 0.5
CHD8Q9HCK8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms