Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Gm10252-201ENSMUST00000209541 832 ntBASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rnf111Q99ML9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf111Q99ML9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rnf111Q99ML9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf111Q99ML9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.15■□□□□ 0.18
Rnf111Q99ML9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf111Q99ML9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms