Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHOX2BQ99453 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PHOX2BQ99453 AC092338.2-201ENST00000568827 1415 ntBASIC19.68■□□□□ 0.74
PHOX2BQ99453 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHOX2BQ99453 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHOX2BQ99453 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHOX2BQ99453 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 MFAP1P1-201ENST00000442257 1255 ntBASIC19.68■□□□□ 0.74
PHOX2BQ99453 AC008040.2-201ENST00000461049 708 ntBASIC19.68■□□□□ 0.74
PHOX2BQ99453 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 C1QL1P1-201ENST00000568105 661 ntBASIC19.68■□□□□ 0.74
PHOX2BQ99453 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 HYMAI.1-201ENST00000620949 238 ntBASIC19.68■□□□□ 0.74
PHOX2BQ99453 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHOX2BQ99453 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHOX2BQ99453 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHOX2BQ99453 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHOX2BQ99453 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.68■□□□□ 0.74
PHOX2BQ99453 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 AC117500.6-201ENST00000624871 588 ntBASIC19.67■□□□□ 0.74
PHOX2BQ99453 AC012183.1-201ENST00000625197 499 ntBASIC19.67■□□□□ 0.74
PHOX2BQ99453 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHOX2BQ99453 KRT8P8-201ENST00000434750 1448 ntBASIC19.67■□□□□ 0.74
PHOX2BQ99453 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.67■□□□□ 0.74
PHOX2BQ99453 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 SLC25A1P2-201ENST00000430693 912 ntBASIC19.66■□□□□ 0.74
PHOX2BQ99453 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 SLC25A6P4-201ENST00000586535 553 ntBASIC19.66■□□□□ 0.74
PHOX2BQ99453 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHOX2BQ99453 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.66■□□□□ 0.74
PHOX2BQ99453 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHOX2BQ99453 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHOX2BQ99453 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHOX2BQ99453 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHOX2BQ99453 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHOX2BQ99453 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 AL732292.2-201ENST00000609649 430 ntBASIC19.65■□□□□ 0.74
PHOX2BQ99453 AC120114.3-201ENST00000611923 658 ntBASIC19.65■□□□□ 0.74
PHOX2BQ99453 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PHOX2BQ99453 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHOX2BQ99453 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms