Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD1Q96PZ7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.61■□□□□ 0.25
CSMD1Q96PZ7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.61■□□□□ 0.25
CSMD1Q96PZ7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 AP006587.1-201ENST00000534129 1502 ntBASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 MIR574-201ENST00000385209 96 ntBASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 AC011484.1-201ENST00000377652 1995 ntBASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSMD1Q96PZ7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 MRPL3P1-201ENST00000400109 1033 ntBASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 AC112907.2-201ENST00000448639 330 ntBASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 AL662844.1-201ENST00000546340 181 ntBASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 KRT18P1-202ENST00000452408 1331 ntBASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 TSPY12P-201ENST00000421279 868 ntBASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 AL157384.1-201ENST00000445995 2473 ntBASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSMD1Q96PZ7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 AL391422.3-201ENST00000603791 2761 ntBASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CSMD1Q96PZ7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 FAM220CP-201ENST00000395253 831 ntBASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 AC120114.3-201ENST00000611923 658 ntBASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 BX640515.1-201ENST00000617215 977 ntBASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 LINC01465-201ENST00000408887 1940 ntBASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSMD1Q96PZ7 KRT8P8-201ENST00000434750 1448 ntBASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 TSPY17P-201ENST00000450329 467 ntBASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 SLC25A1P1-201ENST00000528351 927 ntBASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 AC011498.5-201ENST00000592027 486 ntBASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSMD1Q96PZ7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms