Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 HYMAI.1-201ENST00000620949 238 ntBASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 FEM1AP1-201ENST00000431297 1995 ntBASIC21.56■■□□□ 1.04
KLHDC9Q8NEP7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 HCG4P8-203ENST00000443049 980 ntBASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 AC069148.1-201ENST00000608741 768 ntBASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 AC083849.1-201ENST00000615227 514 ntBASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.55■■□□□ 1.04
KLHDC9Q8NEP7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 CLEC4GP1-201ENST00000596555 870 ntBASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KLHDC9Q8NEP7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 VENTXP5-201ENST00000523979 775 ntBASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHDC9Q8NEP7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 AP000523.1-201ENST00000398242 1049 ntBASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 AC026396.1-201ENST00000419388 421 ntBASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 AC112907.2-201ENST00000448639 330 ntBASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 ZNF444P1-201ENST00000559497 298 ntBASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 NEK4P2-201ENST00000580004 1012 ntBASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
KLHDC9Q8NEP7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.03
KLHDC9Q8NEP7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
KLHDC9Q8NEP7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KLHDC9Q8NEP7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KLHDC9Q8NEP7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KLHDC9Q8NEP7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms