Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 Z85996.1-201ENST00000494644 937 ntBASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 AL121894.2-201ENST00000602977 491 ntBASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 PCED1CP-201ENST00000419887 785 ntBASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 AC009947.2-201ENST00000444014 672 ntBASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 TSPY17P-201ENST00000450329 467 ntBASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEFF1Q8IYR6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 AL023803.3-201ENST00000615559 522 ntBASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEFF1Q8IYR6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TMEFF1Q8IYR6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 AL359075.1-203ENST00000462729 1002 ntBASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 FAM86EP-206ENST00000510506 987 ntBASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 KRT126P-201ENST00000549467 1181 ntBASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 AL353719.1-201ENST00000566847 864 ntBASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 AC093458.2-201ENST00000623150 629 ntBASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 KRT8P8-201ENST00000434750 1448 ntBASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TMEFF1Q8IYR6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms