Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATP1B3P54709 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
ATP1B3P54709 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 AC093503.3-201ENST00000624917 2352 ntBASIC16.87■□□□□ 0.29
ATP1B3P54709 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ATP1B3P54709 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ATP1B3P54709 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP1B3P54709 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP1B3P54709 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP1B3P54709 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP1B3P54709 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP1B3P54709 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP1B3P54709 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP1B3P54709 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP1B3P54709 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATP1B3P54709 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ATP1B3P54709 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ATP1B3P54709 AL390719.1-204ENST00000412397 1219 ntBASIC16.86■□□□□ 0.29
ATP1B3P54709 CDCA4P2-201ENST00000441182 718 ntBASIC16.86■□□□□ 0.29
ATP1B3P54709 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.86■□□□□ 0.29
ATP1B3P54709 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP1B3P54709 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.86■□□□□ 0.29
ATP1B3P54709 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 IKBKGP1-201ENST00000612193 1073 ntBASIC16.86■□□□□ 0.29
ATP1B3P54709 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP1B3P54709 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP1B3P54709 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP1B3P54709 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP1B3P54709 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
ATP1B3P54709 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP1B3P54709 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP1B3P54709 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.85■□□□□ 0.29
ATP1B3P54709 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP1B3P54709 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP1B3P54709 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP1B3P54709 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP1B3P54709 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP1B3P54709 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATP1B3P54709 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP1B3P54709 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP1B3P54709 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATP1B3P54709 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATP1B3P54709 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP1B3P54709 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP1B3P54709 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATP1B3P54709 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP1B3P54709 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATP1B3P54709 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 AC005082.1-201ENST00000413042 2259 ntBASIC16.84■□□□□ 0.29
ATP1B3P54709 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 MIR663A-201ENST00000385250 93 ntBASIC16.84■□□□□ 0.29
ATP1B3P54709 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ATP1B3P54709 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATP1B3P54709 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP1B3P54709 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATP1B3P54709 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms