Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RXRBP28702 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.64■■□□□ 1.7
RXRBP28702 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RXRBP28702 AC073648.2-201ENST00000510116 352 ntBASIC25.64■■□□□ 1.7
RXRBP28702 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
RXRBP28702 AP001160.2-201ENST00000596071 487 ntBASIC25.64■■□□□ 1.7
RXRBP28702 TP73-AS1-207ENST00000624167 988 ntBASIC25.64■■□□□ 1.7
RXRBP28702 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RXRBP28702 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.64■■□□□ 1.69
RXRBP28702 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
RXRBP28702 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
RXRBP28702 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RXRBP28702 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RXRBP28702 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RXRBP28702 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC25.63■■□□□ 1.69
RXRBP28702 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
RXRBP28702 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RXRBP28702 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RXRBP28702 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC25.63■■□□□ 1.69
RXRBP28702 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.63■■□□□ 1.69
RXRBP28702 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RXRBP28702 SPEG-225ENST00000617028 815 ntTSL 5 BASIC25.63■■□□□ 1.69
RXRBP28702 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
RXRBP28702 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
RXRBP28702 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RXRBP28702 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC25.63■■□□□ 1.69
RXRBP28702 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RXRBP28702 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RXRBP28702 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RXRBP28702 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RXRBP28702 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RXRBP28702 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RXRBP28702 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RXRBP28702 AL031284.1-201ENST00000419297 478 ntBASIC25.62■■□□□ 1.69
RXRBP28702 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC25.62■■□□□ 1.69
RXRBP28702 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
RXRBP28702 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
RXRBP28702 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RXRBP28702 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC25.62■■□□□ 1.69
RXRBP28702 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.61■■□□□ 1.69
RXRBP28702 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC25.61■■□□□ 1.69
RXRBP28702 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
RXRBP28702 AF238378.1-201ENST00000526806 358 ntBASIC25.61■■□□□ 1.69
RXRBP28702 AC074051.2-201ENST00000565115 352 ntBASIC25.61■■□□□ 1.69
RXRBP28702 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC25.61■■□□□ 1.69
RXRBP28702 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC25.61■■□□□ 1.69
RXRBP28702 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RXRBP28702 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RXRBP28702 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC25.61■■□□□ 1.69
RXRBP28702 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RXRBP28702 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RXRBP28702 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RXRBP28702 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC25.6■■□□□ 1.69
RXRBP28702 AC098831.1-202ENST00000438821 336 ntBASIC25.6■■□□□ 1.69
RXRBP28702 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RXRBP28702 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC25.6■■□□□ 1.69
RXRBP28702 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC25.6■■□□□ 1.69
RXRBP28702 REXO1L6P-202ENST00000619970 1078 ntBASIC25.6■■□□□ 1.69
RXRBP28702 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC25.6■■□□□ 1.69
RXRBP28702 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RXRBP28702 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
RXRBP28702 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
RXRBP28702 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.6■■□□□ 1.69
RXRBP28702 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RXRBP28702 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RXRBP28702 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RXRBP28702 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
RXRBP28702 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RXRBP28702 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RXRBP28702 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC25.59■■□□□ 1.69
RXRBP28702 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC25.59■■□□□ 1.69
RXRBP28702 URGCP-206ENST00000446958 365 ntTSL 2 BASIC25.59■■□□□ 1.69
RXRBP28702 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC25.59■■□□□ 1.69
RXRBP28702 PIN1-206ENST00000587625 878 ntTSL 2 BASIC25.59■■□□□ 1.69
RXRBP28702 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RXRBP28702 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RXRBP28702 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.58■■□□□ 1.69
RXRBP28702 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.58■■□□□ 1.69
RXRBP28702 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RXRBP28702 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RXRBP28702 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RXRBP28702 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RXRBP28702 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RXRBP28702 FAM197Y8-203ENST00000450145 560 ntBASIC25.58■■□□□ 1.69
RXRBP28702 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC25.58■■□□□ 1.69
RXRBP28702 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC25.58■■□□□ 1.69
RXRBP28702 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC25.58■■□□□ 1.69
RXRBP28702 AC099336.1-202ENST00000602961 463 ntBASIC25.58■■□□□ 1.69
RXRBP28702 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.58■■□□□ 1.69
RXRBP28702 AL390719.2-201ENST00000606993 987 ntBASIC25.58■■□□□ 1.69
RXRBP28702 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms