Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL11A2P13942 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.93■■□□□ 1.42
COL11A2P13942 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.93■■□□□ 1.42
COL11A2P13942 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL11A2P13942 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL11A2P13942 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL11A2P13942 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
COL11A2P13942 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL11A2P13942 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.93■■□□□ 1.42
COL11A2P13942 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.93■■□□□ 1.42
COL11A2P13942 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.93■■□□□ 1.42
COL11A2P13942 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.93■■□□□ 1.42
COL11A2P13942 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL11A2P13942 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL11A2P13942 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.93■■□□□ 1.42
COL11A2P13942 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.93■■□□□ 1.42
COL11A2P13942 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.93■■□□□ 1.42
COL11A2P13942 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.93■■□□□ 1.42
COL11A2P13942 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
COL11A2P13942 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
COL11A2P13942 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.92■■□□□ 1.42
COL11A2P13942 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.92■■□□□ 1.42
COL11A2P13942 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL11A2P13942 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL11A2P13942 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL11A2P13942 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL11A2P13942 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL11A2P13942 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.92■■□□□ 1.42
COL11A2P13942 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.92■■□□□ 1.42
COL11A2P13942 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.92■■□□□ 1.42
COL11A2P13942 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
COL11A2P13942 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
COL11A2P13942 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL11A2P13942 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.92■■□□□ 1.42
COL11A2P13942 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL11A2P13942 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL11A2P13942 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.91■■□□□ 1.42
COL11A2P13942 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL11A2P13942 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.91■■□□□ 1.42
COL11A2P13942 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.91■■□□□ 1.42
COL11A2P13942 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.91■■□□□ 1.42
COL11A2P13942 AL691432.3-201ENST00000621860 400 ntBASIC23.91■■□□□ 1.42
COL11A2P13942 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
COL11A2P13942 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL11A2P13942 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL11A2P13942 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL11A2P13942 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL11A2P13942 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL11A2P13942 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL11A2P13942 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.9■■□□□ 1.42
COL11A2P13942 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL11A2P13942 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL11A2P13942 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.9■■□□□ 1.42
COL11A2P13942 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL11A2P13942 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
COL11A2P13942 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL11A2P13942 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL11A2P13942 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.9■■□□□ 1.42
COL11A2P13942 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.9■■□□□ 1.42
COL11A2P13942 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.9■■□□□ 1.42
COL11A2P13942 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
COL11A2P13942 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
COL11A2P13942 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
COL11A2P13942 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL11A2P13942 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL11A2P13942 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL11A2P13942 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL11A2P13942 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.89■■□□□ 1.42
COL11A2P13942 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.89■■□□□ 1.42
COL11A2P13942 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL11A2P13942 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
COL11A2P13942 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
COL11A2P13942 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL11A2P13942 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL11A2P13942 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL11A2P13942 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL11A2P13942 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
COL11A2P13942 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
COL11A2P13942 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.89■■□□□ 1.41
COL11A2P13942 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL11A2P13942 KRT8P10-201ENST00000450021 1447 ntBASIC23.89■■□□□ 1.41
COL11A2P13942 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
COL11A2P13942 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
COL11A2P13942 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.88■■□□□ 1.41
COL11A2P13942 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.88■■□□□ 1.41
COL11A2P13942 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.88■■□□□ 1.41
COL11A2P13942 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.88■■□□□ 1.41
COL11A2P13942 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL11A2P13942 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL11A2P13942 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.88■■□□□ 1.41
COL11A2P13942 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.88■■□□□ 1.41
COL11A2P13942 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.88■■□□□ 1.41
COL11A2P13942 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL11A2P13942 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.88■■□□□ 1.41
COL11A2P13942 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.88■■□□□ 1.41
COL11A2P13942 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL11A2P13942 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL11A2P13942 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.87■■□□□ 1.41
COL11A2P13942 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms