Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SLC25A1P4-201ENST00000567977 778 ntBASIC23.52■■□□□ 1.36
COL1A1P02452 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.52■■□□□ 1.36
COL1A1P02452 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.52■■□□□ 1.36
COL1A1P02452 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A1P02452 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.52■■□□□ 1.36
COL1A1P02452 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A1P02452 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A1P02452 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A1P02452 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
COL1A1P02452 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A1P02452 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A1P02452 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
COL1A1P02452 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
COL1A1P02452 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.51■■□□□ 1.35
COL1A1P02452 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.51■■□□□ 1.35
COL1A1P02452 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.51■■□□□ 1.35
COL1A1P02452 AL160286.2-201ENST00000567150 934 ntBASIC23.51■■□□□ 1.35
COL1A1P02452 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.51■■□□□ 1.35
COL1A1P02452 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A1P02452 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A1P02452 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A1P02452 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.51■■□□□ 1.35
COL1A1P02452 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
COL1A1P02452 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A1P02452 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.51■■□□□ 1.35
COL1A1P02452 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A1P02452 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A1P02452 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A1P02452 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.5■■□□□ 1.35
COL1A1P02452 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A1P02452 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A1P02452 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
COL1A1P02452 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.5■■□□□ 1.35
COL1A1P02452 LINC01238-205ENST00000567549 1107 ntBASIC23.5■■□□□ 1.35
COL1A1P02452 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.5■■□□□ 1.35
COL1A1P02452 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.5■■□□□ 1.35
COL1A1P02452 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.5■■□□□ 1.35
COL1A1P02452 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
COL1A1P02452 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A1P02452 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A1P02452 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A1P02452 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A1P02452 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.49■■□□□ 1.35
COL1A1P02452 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.49■■□□□ 1.35
COL1A1P02452 MYC-208ENST00000641036 567 ntBASIC23.49■■□□□ 1.35
COL1A1P02452 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.49■■□□□ 1.35
COL1A1P02452 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
COL1A1P02452 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A1P02452 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.49■■□□□ 1.35
COL1A1P02452 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.49■■□□□ 1.35
COL1A1P02452 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.49■■□□□ 1.35
COL1A1P02452 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.49■■□□□ 1.35
COL1A1P02452 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
COL1A1P02452 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
COL1A1P02452 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
COL1A1P02452 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.48■■□□□ 1.35
COL1A1P02452 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.48■■□□□ 1.35
COL1A1P02452 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.48■■□□□ 1.35
COL1A1P02452 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A1P02452 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A1P02452 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
COL1A1P02452 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A1P02452 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.48■■□□□ 1.35
COL1A1P02452 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
COL1A1P02452 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.48■■□□□ 1.35
COL1A1P02452 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.48■■□□□ 1.35
COL1A1P02452 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.48■■□□□ 1.35
COL1A1P02452 AC063952.2-201ENST00000498792 1227 ntBASIC23.48■■□□□ 1.35
COL1A1P02452 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.48■■□□□ 1.35
COL1A1P02452 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.48■■□□□ 1.35
COL1A1P02452 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A1P02452 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A1P02452 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A1P02452 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.47■■□□□ 1.35
COL1A1P02452 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
COL1A1P02452 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.47■■□□□ 1.35
COL1A1P02452 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A1P02452 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.47■■□□□ 1.35
COL1A1P02452 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.47■■□□□ 1.35
COL1A1P02452 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.47■■□□□ 1.35
COL1A1P02452 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.47■■□□□ 1.35
COL1A1P02452 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A1P02452 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A1P02452 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.47■■□□□ 1.35
COL1A1P02452 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A1P02452 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.47■■□□□ 1.35
COL1A1P02452 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A1P02452 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A1P02452 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.47■■□□□ 1.35
COL1A1P02452 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms