Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHD1O14646 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
CHD1O14646 AC034232.1-201ENST00000506026 1064 ntBASIC31.69■■■□□ 2.66
CHD1O14646 FOSL1P1-201ENST00000511041 816 ntBASIC31.69■■■□□ 2.66
CHD1O14646 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHD1O14646 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHD1O14646 IL9RP2-201ENST00000423948 1312 ntBASIC31.69■■■□□ 2.66
CHD1O14646 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC31.69■■■□□ 2.66
CHD1O14646 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC31.69■■■□□ 2.66
CHD1O14646 TBC1D3P2-202ENST00000577902 1649 ntBASIC31.69■■■□□ 2.66
CHD1O14646 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
CHD1O14646 TOB2P1-201ENST00000469761 992 ntBASIC31.69■■■□□ 2.66
CHD1O14646 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC31.69■■■□□ 2.66
CHD1O14646 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC31.69■■■□□ 2.66
CHD1O14646 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHD1O14646 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHD1O14646 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CHD1O14646 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
CHD1O14646 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHD1O14646 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CHD1O14646 LINC00265-3P-201ENST00000447588 903 ntBASIC31.68■■■□□ 2.66
CHD1O14646 AC138894.3-201ENST00000603787 634 ntBASIC31.68■■■□□ 2.66
CHD1O14646 AF228730.7-201ENST00000641842 219 ntBASIC31.68■■■□□ 2.66
CHD1O14646 KRT16P6-202ENST00000425692 1426 ntBASIC31.68■■■□□ 2.66
CHD1O14646 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHD1O14646 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHD1O14646 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CHD1O14646 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC31.67■■■□□ 2.66
CHD1O14646 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
CHD1O14646 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC31.67■■■□□ 2.66
CHD1O14646 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC31.67■■■□□ 2.66
CHD1O14646 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHD1O14646 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC31.67■■■□□ 2.66
CHD1O14646 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHD1O14646 LINC01465-201ENST00000408887 1940 ntBASIC31.67■■■□□ 2.66
CHD1O14646 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD1O14646 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CHD1O14646 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC31.66■■■□□ 2.66
CHD1O14646 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC31.66■■■□□ 2.66
CHD1O14646 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
CHD1O14646 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC31.66■■■□□ 2.66
CHD1O14646 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC31.66■■■□□ 2.66
CHD1O14646 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC31.66■■■□□ 2.66
CHD1O14646 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD1O14646 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD1O14646 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC31.66■■■□□ 2.66
CHD1O14646 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC31.66■■■□□ 2.66
CHD1O14646 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC31.66■■■□□ 2.66
CHD1O14646 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC31.66■■■□□ 2.66
CHD1O14646 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD1O14646 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD1O14646 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CHD1O14646 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD1O14646 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD1O14646 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC31.65■■■□□ 2.66
CHD1O14646 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC31.65■■■□□ 2.66
CHD1O14646 AC092865.5-201ENST00000545435 363 ntBASIC31.65■■■□□ 2.66
CHD1O14646 AL121772.3-201ENST00000610840 674 ntBASIC31.65■■■□□ 2.66
CHD1O14646 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC31.65■■■□□ 2.66
CHD1O14646 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC31.65■■■□□ 2.66
CHD1O14646 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC31.65■■■□□ 2.66
CHD1O14646 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC31.65■■■□□ 2.66
CHD1O14646 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
CHD1O14646 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD1O14646 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD1O14646 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD1O14646 KRT8P11-201ENST00000409686 1436 ntBASIC31.64■■■□□ 2.66
CHD1O14646 AL590627.1-203ENST00000421194 1026 ntBASIC31.64■■■□□ 2.66
CHD1O14646 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC31.64■■■□□ 2.66
CHD1O14646 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC31.64■■■□□ 2.66
CHD1O14646 AP000867.3-201ENST00000524675 377 ntBASIC31.64■■■□□ 2.66
CHD1O14646 CALM3-211ENST00000598871 561 ntTSL 4 BASIC31.64■■■□□ 2.66
CHD1O14646 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC31.64■■■□□ 2.66
CHD1O14646 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC31.64■■■□□ 2.66
CHD1O14646 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHD1O14646 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
CHD1O14646 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHD1O14646 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.65
CHD1O14646 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.65
CHD1O14646 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CHD1O14646 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC31.63■■■□□ 2.65
CHD1O14646 VPS51-217ENST00000639871 243 ntTSL 5 BASIC31.63■■■□□ 2.65
CHD1O14646 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
CHD1O14646 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHD1O14646 ECEL1P1-201ENST00000373592 1742 ntBASIC31.63■■■□□ 2.65
CHD1O14646 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHD1O14646 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC31.62■■■□□ 2.65
CHD1O14646 IL11-204ENST00000590625 1028 ntTSL 2 BASIC31.62■■■□□ 2.65
CHD1O14646 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHD1O14646 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC31.62■■■□□ 2.65
CHD1O14646 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHD1O14646 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC31.62■■■□□ 2.65
CHD1O14646 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC31.61■■■□□ 2.65
CHD1O14646 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC31.61■■■□□ 2.65
CHD1O14646 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC31.61■■■□□ 2.65
CHD1O14646 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHD1O14646 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CHD1O14646 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC31.61■■■□□ 2.65
CHD1O14646 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
CHD1O14646 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC31.61■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms