Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Gm11643-201ENSMUST00000119578 864 ntBASIC12.93□□□□□ -0.34
Trav16A0A075B653 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.93□□□□□ -0.34
Trav16A0A075B653 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16A0A075B653 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Gm7290-201ENSMUST00000104990 617 ntBASIC12.92□□□□□ -0.34
Trav16A0A075B653 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Gm12918-201ENSMUST00000120234 636 ntBASIC12.92□□□□□ -0.34
Trav16A0A075B653 Gm15710-201ENSMUST00000121821 636 ntBASIC12.92□□□□□ -0.34
Trav16A0A075B653 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Gm5075-201ENSMUST00000196916 622 ntBASIC12.92□□□□□ -0.34
Trav16A0A075B653 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.92□□□□□ -0.34
Trav16A0A075B653 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.92□□□□□ -0.34
Trav16A0A075B653 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16A0A075B653 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Gm6211-202ENSMUST00000167849 925 ntBASIC12.91□□□□□ -0.34
Trav16A0A075B653 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.91□□□□□ -0.34
Trav16A0A075B653 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms