Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC087385.3-201ENST00000620477 187 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AC067931.1-201ENST00000624190 671 ntBASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAPPC4Q9Y296 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 MIR550A3-201ENST00000390735 95 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RNU6-1320P-201ENST00000390838 107 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RNU6-1269P-201ENST00000391139 107 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AL133270.1-201ENST00000402635 279 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC006455.6-201ENST00000426192 893 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 BX119904.1-201ENST00000432026 348 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RPL7P61-201ENST00000451721 751 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RNU6-599P-201ENST00000459383 107 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RNU6-1193P-201ENST00000459461 107 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RPS3AP41-201ENST00000462701 778 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RN7SL610P-201ENST00000463845 291 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC108022.1-201ENST00000493466 478 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 SCARNA22-201ENST00000503991 125 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 IGKV1-32-201ENST00000519290 311 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC051619.2-201ENST00000559063 397 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 OR1F2P-201ENST00000570470 933 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 MIR3667-201ENST00000581025 74 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RPL7P50-201ENST00000600588 727 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC130352.1-201ENST00000602979 661 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AL512782.1-201ENST00000603093 364 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AL021707.7-201ENST00000607991 416 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AL445528.2-201ENST00000620582 470 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RNU6-368P-201ENST00000620928 107 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 RNU6-538P-201ENST00000622329 107 ntBASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAPPC4Q9Y296 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 RHOT1P2-201ENST00000366423 333 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 RN7SKP100-201ENST00000411258 284 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 GLUD1P9-201ENST00000420997 1173 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 RPL12P3-201ENST00000440080 396 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 FCF1P7-201ENST00000451185 558 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 RPS3AP53-201ENST00000454716 778 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC091685.2-201ENST00000454924 864 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 PSMC1P13-201ENST00000458195 985 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC107015.1-201ENST00000466902 747 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC008410.1-201ENST00000483777 339 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AGGF1P3-201ENST00000493675 1213 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 PPBPP1-201ENST00000510807 373 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 HMGB3P13-201ENST00000511263 607 ntBASIC4.28□□□□□ -1.72
TRAPPC4Q9Y296 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms