Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 HMGN2P6-201ENST00000551091 273 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 LSM3P2-201ENST00000551246 273 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 POLR2KP1-201ENST00000553226 168 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AL049830.4-201ENST00000555149 351 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 ZNF92P3-201ENST00000596594 954 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC087763.1-201ENST00000603391 286 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC005034.4-201ENST00000603612 899 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 SDR42E1P1-201ENST00000611327 477 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC011815.3-201ENST00000624194 473 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 OR9K1P-202ENST00000641111 3217 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 MTND4P31-201ENST00000425607 1343 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 GTF2IP5-201ENST00000414608 731 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 TBCAP2-201ENST00000416175 326 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC009965.2-201ENST00000425328 970 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 TRY2P-201ENST00000448860 689 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC078857.1-201ENST00000469870 667 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 RPL7AP6-201ENST00000477943 801 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 RN7SL319P-201ENST00000480656 221 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 COX6B1P2-201ENST00000489624 230 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC140172.1-201ENST00000502928 141 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 OR5AZ1P-201ENST00000527448 943 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 GCSHP4-201ENST00000538792 439 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC093510.2-201ENST00000562820 896 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AL512506.1-201ENST00000613918 449 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC015914.2-201ENST00000618167 288 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC112694.2-201ENST00000623697 768 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC083865.1-201ENST00000636634 831 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.49□□□□□ -1.53
BLOC1S4Q9NUP1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC008758.3-201ENST00000507003 1829 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AL672167.1-204ENST00000641875 3017 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC017079.1-201ENST00000333650 415 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 RNA5SP123-201ENST00000363244 119 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 RNU6-792P-201ENST00000363490 107 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AP002530.1-201ENST00000405705 684 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 RBMY2QP-201ENST00000429799 1147 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 TPMTP4-201ENST00000450749 678 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 CYCSP42-201ENST00000450823 238 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC008638.1-201ENST00000506035 866 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC010285.3-201ENST00000511668 676 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms