Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNB1IP1Q9NPC3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNB1IP1Q9NPC3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCNB1IP1Q9NPC3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNB1IP1Q9NPC3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCNB1IP1Q9NPC3 AC090017.1-201ENST00000548612 1779 ntBASIC4.4□□□□□ -1.71
CCNB1IP1Q9NPC3 Z98755.1-201ENST00000407015 1384 ntBASIC4.4□□□□□ -1.71
CCNB1IP1Q9NPC3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 CR788268.1-201ENST00000603931 1809 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 OR56B2P-201ENST00000317102 954 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 RNU4-34P-201ENST00000410431 124 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 RN7SKP213-201ENST00000410746 298 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AL160275.2-201ENST00000412010 394 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 MTCYBP7-201ENST00000419540 1134 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AL158073.1-201ENST00000426848 1104 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AL451139.1-201ENST00000434718 346 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 RPS20P1-201ENST00000434853 354 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC093716.1-201ENST00000435923 377 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC092647.3-201ENST00000443044 633 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC011753.3-201ENST00000443436 406 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AL137845.2-201ENST00000444292 988 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 TCEA1P1-201ENST00000449716 880 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 IGHV5-78-201ENST00000450948 295 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 RPL31P53-201ENST00000457065 348 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC006967.1-201ENST00000467608 589 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC004980.4-201ENST00000513375 203 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 RNU6-709P-201ENST00000517257 104 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC087888.1-201ENST00000550884 1254 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC006116.3-201ENST00000592968 361 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AC090948.2-201ENST00000607363 564 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AP000894.4-201ENST00000610185 483 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 AP000756.2-201ENST00000624168 2567 ntBASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 PHKBP1-201ENST00000450951 1951 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AL445437.1-201ENST00000623157 3087 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC011155.1-201ENST00000316512 456 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 MIR448-201ENST00000362131 111 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 RNA5SP507-201ENST00000363603 121 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AL136116.2-201ENST00000404020 785 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC093162.1-201ENST00000419682 124 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC069285.2-201ENST00000440210 275 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC096741.1-201ENST00000472250 846 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC090114.3-201ENST00000479267 829 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 RN7SL319P-201ENST00000480656 221 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC008147.3-201ENST00000548666 354 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC117490.2-201ENST00000610042 594 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AC011815.3-201ENST00000624194 473 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 A2MP1-204ENST00000566278 4130 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.38□□□□□ -1.71
CCNB1IP1Q9NPC3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNB1IP1Q9NPC3 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.37□□□□□ -1.71
CCNB1IP1Q9NPC3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms