Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 HNRNPCP8-201ENST00000528764 888 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 OR6C73P-201ENST00000546432 358 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC025857.2-201ENST00000602711 238 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC092650.2-201ENST00000619984 902 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC010338.1-201ENST00000621823 717 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC119674.1-212ENST00000641155 993 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 RN7SKP1-201ENST00000365525 307 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 RNU6-723P-201ENST00000383973 107 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 RPL21P111-201ENST00000418453 477 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 CLIC4P3-201ENST00000422221 752 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC000089.1-201ENST00000424559 801 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 VDAC2P4-201ENST00000452925 711 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC018639.1-201ENST00000492994 442 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 RN7SL776P-201ENST00000493390 268 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 MTCO1P30-201ENST00000515244 580 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC093878.1-201ENST00000515630 432 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC002519.2-203ENST00000567043 837 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC060780.3-201ENST00000589464 80 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AL020991.1-201ENST00000612314 373 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 HTR1DP1-201ENST00000616500 888 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 MIR7159-201ENST00000620587 66 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AP003122.6-201ENST00000623831 495 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC009033.1-201ENST00000624279 431 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC000095.2-202ENST00000637415 154 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AC100810.3-201ENST00000633189 2240 ntBASIC6.26□□□□□ -1.41
SSU72Q9NP77 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSU72Q9NP77 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.26□□□□□ -1.41
SSU72Q9NP77 GDI2P1-201ENST00000429312 1336 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC107982.1-201ENST00000507171 1300 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms