Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC104982.1-201ENST00000478775 574 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 RPL5P22-201ENST00000480199 884 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC126177.5-201ENST00000549599 178 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 RPL10P14-201ENST00000565265 298 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC090751.1-201ENST00000566966 267 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AP002802.2-201ENST00000605877 235 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC026790.2-201ENST00000606282 430 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC023509.5-201ENST00000617434 807 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 AC016717.3-201ENST00000624730 554 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 NSRP1P1-201ENST00000444067 1693 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
BRF2Q9HAW0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
BRF2Q9HAW0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 MIR525-201ENST00000384978 85 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 RNU1-149P-201ENST00000390870 161 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC009804.1-201ENST00000400949 179 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 FAM96AP1-201ENST00000430879 482 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CDY14P-201ENST00000431260 1014 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CDY12P-201ENST00000440679 1015 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CDY13P-201ENST00000445813 1015 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CDY23P-201ENST00000451661 1014 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC144530.1-201ENST00000452862 555 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC023141.9-201ENST00000458734 412 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 RN7SL717P-201ENST00000478343 297 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 PRELID3BP6-201ENST00000503839 571 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC012400.1-201ENST00000518452 381 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC008562.1-201ENST00000521763 330 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 SMARCE1P4-201ENST00000523647 241 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AL359219.2-201ENST00000555184 348 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 MTND4LP24-201ENST00000572277 291 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 AC018695.5-201ENST00000605872 315 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CR392039.4-201ENST00000624968 501 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 MTCO1P6-201ENST00000481192 1384 ntBASIC5.01□□□□□ -1.61
BRF2Q9HAW0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRF2Q9HAW0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5□□□□□ -1.61
BRF2Q9HAW0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5□□□□□ -1.61
BRF2Q9HAW0 MAPK10-328ENST00000641553 4009 ntBASIC5□□□□□ -1.61
BRF2Q9HAW0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
BRF2Q9HAW0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5□□□□□ -1.61
BRF2Q9HAW0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
BRF2Q9HAW0 ADAM5-202ENST00000399789 1942 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms