Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AL442639.1-201ENST00000625030 1899 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC011155.1-201ENST00000316512 456 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 RNU1-82P-201ENST00000390851 165 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC240504.1-201ENST00000395709 845 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 SPTLC1P2-201ENST00000407089 121 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 FABP7P1-201ENST00000424004 391 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AL353597.2-202ENST00000434901 373 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 EIF4A1P11-201ENST00000451239 222 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 RPS6P2-201ENST00000454208 705 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 RPL7AP52-201ENST00000458096 790 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC074386.1-201ENST00000476560 767 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 RN7SL808P-201ENST00000496066 299 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC110775.1-201ENST00000513721 462 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC108471.1-201ENST00000513977 287 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC068714.1-201ENST00000559623 800 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 BGLT3-201ENST00000564523 994 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC130352.1-201ENST00000602979 661 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC073137.1-201ENST00000605636 634 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AL008729.2-201ENST00000606393 473 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AL445222.1-201ENST00000607259 628 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 OR7A19P-201ENST00000608051 733 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AL359757.1-201ENST00000623176 255 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 MAPK10-303ENST00000641324 3959 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 AP001273.1-201ENST00000624493 3152 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 SCN1A-220ENST00000641603 12506 ntBASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC090017.1-201ENST00000548612 1779 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 IRF5P1-201ENST00000504852 2164 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AL031119.1-201ENST00000404707 1879 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 EIF4A1P3-201ENST00000411521 244 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 COX6B1P1-201ENST00000415962 213 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 Z80107.2-201ENST00000445127 392 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 SUMO2P1-206ENST00000445436 284 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 OR1H1P-201ENST00000448731 937 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC079168.2-201ENST00000453977 416 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC090142.1-201ENST00000465776 462 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 UBA52P3-201ENST00000491303 382 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 SCARNA22-201ENST00000503991 125 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC117525.1-201ENST00000515228 503 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC005520.3-201ENST00000602874 370 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 MTCO2P22-201ENST00000603246 681 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC018445.2-201ENST00000622987 260 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 AC090971.4-201ENST00000560291 1800 ntBASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC40Q9H9A6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC120338.1-201ENST00000625074 1541 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC093535.2-201ENST00000624769 2326 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 OR56B2P-201ENST00000317102 954 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms