Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC112484.3-201ENST00000505910 329 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC006499.4-201ENST00000510947 694 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC141257.3-201ENST00000572906 215 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 MIR4310-201ENST00000582950 57 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 MAGOH2P-202ENST00000584384 429 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL121873.1-201ENST00000616013 524 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC092692.1-201ENST00000623625 2595 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC073365.1-203ENST00000641055 1992 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 OR10J6P-201ENST00000289731 930 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 RPS24P12-201ENST00000402084 394 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 Y_RNA.619-201ENST00000410951 90 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 OR8G2P-201ENST00000412796 908 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 RPS7P13-201ENST00000413955 498 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC004448.2-201ENST00000422360 586 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 RPL12P34-201ENST00000424532 479 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 CYCSP12-201ENST00000437729 300 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 USP9YP29-201ENST00000445112 563 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 EPS15P1-201ENST00000448836 336 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 SNRPFP4-201ENST00000456366 242 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC026410.2-201ENST00000460281 156 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC106872.3-201ENST00000495104 446 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 CDC42P4-201ENST00000510507 563 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC106800.3-201ENST00000511389 308 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC008429.4-201ENST00000521201 182 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC008055.1-201ENST00000547032 609 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC023968.1-201ENST00000560719 475 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC002519.2-203ENST00000567043 837 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 PRELID3BP8-201ENST00000604148 295 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AL683813.2-201ENST00000605245 502 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC080013.4-201ENST00000607624 649 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 MIR6721-201ENST00000617181 87 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AC099842.1-201ENST00000619919 596 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 AL162377.2-201ENST00000624532 337 ntBASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.12□□□□□ -1.27
TRAIPQ9BWF2 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms