Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC138832.1-201ENST00000522871 556 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC137768.1-201ENST00000549998 553 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL121579.2-201ENST00000555466 590 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 NPM1P47-201ENST00000560843 856 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 OR1E3-201ENST00000575608 948 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC016727.1-205ENST00000605437 569 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 MIR7109-201ENST00000613748 65 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC104985.2-201ENST00000620598 500 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC092794.2-201ENST00000620933 563 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AL157786.1-207ENST00000627771 695 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 GUCY1B2-204ENST00000531898 1979 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC114786.1-201ENST00000512892 1415 ntBASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCHD1Q96NR3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RNU1-65P-201ENST00000363919 148 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RNU6-114P-201ENST00000384704 105 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 MIR181A1-201ENST00000385026 110 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 TMSB4XP8-201ENST00000402089 135 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RN7SKP144-201ENST00000411108 279 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RNU2-18P-201ENST00000411224 162 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AL450992.3-201ENST00000413192 568 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 TMSB4XP6-201ENST00000415187 135 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 TMSB4XP1-201ENST00000424567 135 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 IGLV3-4-201ENST00000432300 244 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 FMO7P-201ENST00000436045 768 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 PCBP2P1-201ENST00000437262 977 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 MORF4-201ENST00000447135 971 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC092967.1-201ENST00000449016 481 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RN7SL254P-201ENST00000460609 284 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC010307.1-201ENST00000467206 836 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AL121769.1-201ENST00000469473 401 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 MTND6P6-201ENST00000478031 263 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RPL12P30-201ENST00000488389 499 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RPL9P6-201ENST00000492764 598 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC098799.3-201ENST00000506095 438 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC048346.1-201ENST00000510247 144 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC074344.1-201ENST00000512823 224 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RNY4P37-201ENST00000516225 96 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP135-201ENST00000517019 125 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AP003080.1-202ENST00000526526 915 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 HMGN2P47-201ENST00000559378 272 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 MIR4301-201ENST00000577203 66 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AL356055.1-201ENST00000602528 446 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC005084.1-201ENST00000605160 304 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms