Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC022616.6-201ENST00000520479 119 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 GLYATL1P4-201ENST00000529326 906 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC068305.2-201ENST00000550567 1205 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC023968.1-201ENST00000560719 475 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC068802.1-201ENST00000603420 732 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC007255.2-201ENST00000604053 631 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC004241.2-201ENST00000614562 444 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 RN7SL126P-201ENST00000616400 299 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 AC073488.8-201ENST00000631952 757 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.79□□□□□ -1.16
LRCH3Q96II8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
LRCH3Q96II8 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LRCH3Q96II8 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC093297.3-201ENST00000607056 2517 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC104083.1-201ENST00000569449 2615 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 OR10R3P-201ENST00000361688 942 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 SNORA20.2-201ENST00000383922 131 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 BTBD10P2-201ENST00000404779 676 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 RN7SKP158-201ENST00000410453 326 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AL136133.1-201ENST00000413694 376 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AL590609.2-201ENST00000421430 368 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC079355.1-201ENST00000421770 223 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 RGS17P1-201ENST00000423358 553 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 RAC1P6-201ENST00000423911 575 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 GAPDHP37-201ENST00000442317 968 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 RPL21P23-201ENST00000446654 460 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 RPS20P21-201ENST00000466859 343 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 RN7SL174P-201ENST00000475578 289 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 RN7SL88P-201ENST00000480166 299 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AL163973.1-201ENST00000484753 577 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 RPL32P9-201ENST00000487963 407 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 HMGN1P16-201ENST00000508308 283 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 OR4D12P-201ENST00000509361 911 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC006499.2-201ENST00000513470 337 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 OR52H2P-201ENST00000514607 902 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC084337.1-201ENST00000524809 686 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC022882.1-201ENST00000532142 501 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 RRN3P3-201ENST00000549207 578 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC113195.1-201ENST00000579952 141 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 MIR4502-201ENST00000580432 81 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 MIR3910-1-201ENST00000580936 111 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC016629.2-201ENST00000597341 199 ntBASIC7.78□□□□□ -1.16
LRCH3Q96II8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 AL512662.1-201ENST00000624850 2251 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms