Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 CNN3P1-201ENST00000401596 935 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 IGLC6-201ENST00000410078 317 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 AC019097.1-201ENST00000424783 735 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 RPL19P21-201ENST00000424919 591 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS1Q92902 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 HMGB1P9-201ENST00000429856 646 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 GAPDHP34-201ENST00000432112 823 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 RPL23AP30-201ENST00000432419 501 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS1Q92902 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.9□□□□□ -1.3
HPS1Q92902 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC6.9□□□□□ -1.3
HPS1Q92902 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.9□□□□□ -1.3
HPS1Q92902 RPL7P59-201ENST00000447700 943 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 HMGB1P7-201ENST00000450921 612 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 AC002553.2-201ENST00000453217 340 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 PTMAP1-205ENST00000455552 325 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 RPL37P3-201ENST00000456825 293 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 RNU7-66P-201ENST00000459469 62 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 GLRXP3-201ENST00000470810 321 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AC097473.1-201ENST00000508142 408 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 BTG4P1-201ENST00000510421 183 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 PGAM4P2-201ENST00000512491 721 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 KRT18P54-201ENST00000513396 748 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS1Q92902 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 AC087280.1-201ENST00000530632 1003 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS1Q92902 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS1Q92902 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HPS1Q92902 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 RN7SL311P-201ENST00000579858 306 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS1Q92902 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS1Q92902 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS1Q92902 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.9□□□□□ -1.3
HPS1Q92902 RN7SL3-201ENST00000610674 299 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 RN7SL113P-201ENST00000619959 299 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AC098657.3-201ENST00000620434 263 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AL109806.1-201ENST00000623967 1248 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 AC099667.1-201ENST00000624222 469 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS1Q92902 RHOXF1P2-201ENST00000635431 502 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
HPS1Q92902 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS1Q92902 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
HPS1Q92902 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HPS1Q92902 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HPS1Q92902 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.9□□□□□ -1.31
HPS1Q92902 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HPS1Q92902 VPS35P1-201ENST00000563400 1518 ntBASIC6.9□□□□□ -1.31
HPS1Q92902 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HPS1Q92902 AC068860.1-201ENST00000623701 3736 ntBASIC6.9□□□□□ -1.31
HPS1Q92902 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.9□□□□□ -1.31
HPS1Q92902 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
HPS1Q92902 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
HPS1Q92902 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HPS1Q92902 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.9□□□□□ -1.31
HPS1Q92902 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC6.9□□□□□ -1.31
HPS1Q92902 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.9□□□□□ -1.31
HPS1Q92902 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
HPS1Q92902 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
HPS1Q92902 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
HPS1Q92902 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.89□□□□□ -1.31
HPS1Q92902 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 BCL9P1-201ENST00000506012 2561 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 AC009831.5-201ENST00000624000 3189 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HPS1Q92902 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HPS1Q92902 SNRPEP3-201ENST00000338402 276 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 RPL32P3-201ENST00000359025 275 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 RNU4-1-201ENST00000363925 141 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 SNORD113-1-201ENST00000365321 69 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 CST13P-201ENST00000376992 428 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.89□□□□□ -1.31
HPS1Q92902 Y_RNA.463-201ENST00000384271 102 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 Y_RNA.482-201ENST00000384377 111 ntBASIC6.89□□□□□ -1.31
HPS1Q92902 RNU6-310P-201ENST00000384655 107 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms