Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC010928.1-201ENST00000592477 1447 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AP000580.1-201ENST00000404439 358 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AL353692.2-201ENST00000407054 335 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 PTP4A1P1-201ENST00000420539 515 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 NMNAT1P2-201ENST00000435192 860 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AL627224.1-201ENST00000448334 444 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC239798.3-201ENST00000454459 408 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 RPL35AP28-201ENST00000459730 331 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC104629.1-201ENST00000494226 508 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 HMGN1P15-201ENST00000513870 295 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 EDDM3DP-201ENST00000554692 434 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC073091.2-201ENST00000603205 907 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC005084.1-201ENST00000605160 304 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC024933.1-201ENST00000608472 348 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC074140.1-201ENST00000621617 208 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC091953.3-201ENST00000623220 236 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AC015871.5-202ENST00000623252 701 ntBASIC5.08□□□□□ -1.6
SEMA4DQ92854 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SEMA4DQ92854 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEMA4DQ92854 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEMA4DQ92854 SMG1P4-204ENST00000523028 4131 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEMA4DQ92854 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEMA4DQ92854 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEMA4DQ92854 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AL080315.1-201ENST00000406055 466 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 SNORA79B-201ENST00000410557 148 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AL513321.1-201ENST00000441175 761 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 MRPL48P1-201ENST00000445390 636 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC092324.1-201ENST00000468671 324 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC069304.1-201ENST00000491593 704 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 RPL23AP73-201ENST00000492507 471 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEMA4DQ92854 MTCO1P31-201ENST00000506355 492 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC010468.3-201ENST00000508225 458 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 RNU6-1102P-201ENST00000516149 96 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 RNU2-30P-201ENST00000516209 141 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 HMGB1P46-201ENST00000520062 610 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 SOX5P1-201ENST00000524155 1127 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC106785.3-201ENST00000564064 847 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 UBE2FP2-201ENST00000566646 462 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC009852.2-201ENST00000567898 485 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 ZNF92P2-201ENST00000600543 1059 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 BMS1P7-201ENST00000602440 1052 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AL512782.1-201ENST00000603093 364 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC073137.1-201ENST00000605636 634 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 MIR6853-201ENST00000619642 74 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AL359757.1-201ENST00000623176 255 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AL359922.3-201ENST00000624779 1670 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SEMA4DQ92854 AL031119.1-201ENST00000404707 1879 ntBASIC5.07□□□□□ -1.6
SEMA4DQ92854 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.06□□□□□ -1.6
SEMA4DQ92854 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.06□□□□□ -1.6
SEMA4DQ92854 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.06□□□□□ -1.6
SEMA4DQ92854 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEMA4DQ92854 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEMA4DQ92854 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SEMA4DQ92854 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms