Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL020991.1-201ENST00000612314 373 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 MIR7159-201ENST00000620587 66 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC129915.3-201ENST00000634128 948 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 ATE1-AS1-202ENST00000636460 506 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC097634.1-201ENST00000604491 2467 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL731556.1-201ENST00000394628 3711 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 MAPK10-261ENST00000641050 3109 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 SNORA21-201ENST00000362423 132 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 Y_RNA.402-201ENST00000383972 102 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 GTF2IP23-201ENST00000423746 351 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 DEFA9P-201ENST00000433042 285 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 RPL22P17-201ENST00000438729 315 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL512286.1-201ENST00000439244 400 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL450263.2-201ENST00000439400 589 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 OR7E125P-201ENST00000443450 846 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC073109.1-201ENST00000445066 978 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 PPIAP20-201ENST00000449839 135 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC002553.3-201ENST00000453002 341 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 SETP20-201ENST00000457046 852 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 RPS27AP2-201ENST00000457576 465 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC115223.1-201ENST00000466377 870 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 CCDC11P1-201ENST00000503137 1162 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC112184.1-201ENST00000505179 312 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AP001858.2-201ENST00000536213 601 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC008127.2-201ENST00000549925 1075 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 MIR4795-201ENST00000584182 89 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC008521.2-201ENST00000591021 259 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC124312.5-201ENST00000604451 268 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL132640.3-201ENST00000630473 177 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC005332.9-201ENST00000620266 2921 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 PABPC1P9-201ENST00000426076 1612 ntBASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHKBP1Q8TBC3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 CUL4AP1-201ENST00000514750 1863 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms