Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ANKRD36P1-201ENST00000344424 659 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 MTND4P13-201ENST00000402078 1023 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC092638.1-201ENST00000411966 1275 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 HMGB1P49-201ENST00000418882 569 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 MRPS21P2-201ENST00000424704 264 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AL365220.1-201ENST00000432923 399 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC073052.1-201ENST00000440417 714 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AL162739.1-201ENST00000450606 307 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 NUTF2P7-201ENST00000453086 375 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 DUTP1-201ENST00000493631 470 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 IGKV1-32-201ENST00000519290 311 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 MTND4P33-201ENST00000556706 766 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 BGLT3-201ENST00000564523 994 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC007346.2-201ENST00000564816 892 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AL445423.1-201ENST00000609941 536 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC091304.6-201ENST00000619761 202 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC123767.1-202ENST00000620407 817 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC130304.1-201ENST00000622942 2385 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
SMC1BQ8NDV3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SMC1BQ8NDV3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SMC1BQ8NDV3 AC018809.2-201ENST00000602436 3823 ntBASIC6.46□□□□□ -1.37
SMC1BQ8NDV3 AC017007.4-201ENST00000503353 1352 ntBASIC6.46□□□□□ -1.37
SMC1BQ8NDV3 MTND4P8-201ENST00000514997 1362 ntBASIC6.46□□□□□ -1.37
SMC1BQ8NDV3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 RNU6-636P-201ENST00000384598 107 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 U3.23-201ENST00000391132 200 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 RNU4-22P-201ENST00000411058 166 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 LINC01347-201ENST00000417964 355 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC004690.1-201ENST00000418216 328 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC084290.1-201ENST00000434995 374 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC122718.1-201ENST00000439448 744 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AL672138.1-201ENST00000450604 1015 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 FAM133DP-201ENST00000464802 691 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 RN7SL41P-201ENST00000476144 297 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC105313.1-201ENST00000509121 353 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 MTND6P2-201ENST00000512226 524 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 HIGD1AP18-201ENST00000520730 278 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC109635.6-201ENST00000525487 1113 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC012321.1-201ENST00000561622 1588 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AGGF1P7-201ENST00000562369 913 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC073569.3-201ENST00000619055 682 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 AC091932.2-201ENST00000623014 291 ntBASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms