Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RN7SL708P-201ENST00000580952 299 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 BNIP3P24-201ENST00000593398 557 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 GAS5-AS1-201ENST00000602767 694 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC113368.1-201ENST00000603736 382 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC008814.1-201ENST00000603797 406 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC073387.2-201ENST00000604797 784 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 VN1R9P-201ENST00000614184 867 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 MIR6861-201ENST00000618657 64 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AP002791.1-201ENST00000623291 381 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 CASC19-204ENST00000641001 2055 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AL138820.1-201ENST00000617901 5305 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC006210.2-201ENST00000367074 1545 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC104333.2-201ENST00000422630 192 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 OSTCP5-201ENST00000425293 453 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC104843.2-201ENST00000427666 297 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC002069.1-201ENST00000429649 1159 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 CYCSP12-201ENST00000437729 300 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 OR10R1P-201ENST00000441524 1141 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC093890.1-201ENST00000502554 540 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 HPRT1P1-201ENST00000509498 657 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC006427.1-201ENST00000514359 712 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AL671862.1-201ENST00000515851 349 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC091515.1-201ENST00000548110 679 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC126177.5-201ENST00000549599 178 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 OR4U1P-201ENST00000554958 912 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC106734.1-201ENST00000568646 663 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 SNORD95-201ENST00000579879 68 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 MTCO2P22-201ENST00000603246 681 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 Z82195.1-201ENST00000604558 398 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 AC084782.3-201ENST00000612282 578 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 HSPA8P18-201ENST00000439846 1928 ntBASIC4.82□□□□□ -1.64
CLIP4Q8N3C7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 KARSP1-201ENST00000451871 1752 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AL355578.1-201ENST00000607405 1328 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RNU4-44P-201ENST00000363050 141 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RNA5SP223-201ENST00000365174 120 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RNU6-906P-201ENST00000384700 70 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RNA5SP339-201ENST00000390987 122 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RNA5SP105-201ENST00000391123 113 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 RN7SKP293-201ENST00000411389 296 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 PTP4A1P1-201ENST00000420539 515 ntBASIC4.81□□□□□ -1.64
CLIP4Q8N3C7 AL133325.1-201ENST00000421090 382 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms